RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 TBCDQ9BTW9 1192 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 CHID1Q9BWS9 393 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 EBPLQ9BY08 206 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 DYRK4Q9NR20 520 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 SLC6A13Q9NSD5 602 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 GULP1Q9UBP9 304 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 C2orf16Q68DN1 1984 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 LRRK1Q38SD2 2015 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 SZT2Q5T011 3432 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 TBC1D3BA6NDS4 549 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 UGDHO60701 494 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 CLPTM1O96005 669 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 ANXA6P08133 673 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 ATP6V1B1P15313 513 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 FSHRP23945 695 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 IMPA1P29218 277 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 TXNL4AP83876 142 aaKnown RBP13.22□□□□□ -0.29
NEK3-205ENST00000610828 EIF4HQ15056 248 aaKnown RBP13.22□□□□□ -0.29
NEK3-205ENST00000610828 NHSL2Q5HYW2 709 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 KRT80Q6KB66 452 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 NOXRED1Q6NXP6 359 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 MMAAQ8IVH4 418 aaKnown RBP13.22□□□□□ -0.29
NEK3-205ENST00000610828 PHACTR4Q8IZ21 702 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 PACRGLQ8N7B6 248 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 KIAA1958Q8N8K9 716 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 PPP1R16AQ96I34 528 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 OR4K3Q96R72 315 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 PKP4Q99569 1192 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 TSC22D3Q99576 134 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 ZCCHC2Q9C0B9 1178 aaKnown RBP13.22□□□□□ -0.29
NEK3-205ENST00000610828 INVSQ9Y283 1065 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 PCDHB14Q9Y5E9 798 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 B3GALT4O96024 378 aa13.21□□□□□ -0.29
NEK3-205ENST00000610828 LDLRP01130 860 aa13.21□□□□□ -0.29
NEK3-205ENST00000610828 GSNP06396 782 aa13.21□□□□□ -0.29
NEK3-205ENST00000610828 CDH1P12830 882 aa13.21□□□□□ -0.29
NEK3-205ENST00000610828 POLE2P56282 527 aa13.21□□□□□ -0.29
NEK3-205ENST00000610828 ATP6AP1Q15904 470 aa13.21□□□□□ -0.29
NEK3-205ENST00000610828 RUNDC3AQ59EK9 446 aa13.21□□□□□ -0.29
NEK3-205ENST00000610828 TMTC4Q5T4D3 741 aa13.21□□□□□ -0.29
NEK3-205ENST00000610828 GCNT7Q6ZNI0 430 aa13.21□□□□□ -0.29
NEK3-205ENST00000610828 SATL1Q86VE3 508 aa13.21□□□□□ -0.29
NEK3-205ENST00000610828 NLRP8Q86W28 1048 aa13.21□□□□□ -0.29
NEK3-205ENST00000610828 CARM1Q86X55 608 aa13.21□□□□□ -0.29
NEK3-205ENST00000610828 AADATQ8N5Z0 425 aa13.21□□□□□ -0.29
NEK3-205ENST00000610828 TERB1Q8NA31 727 aa13.21□□□□□ -0.29
NEK3-205ENST00000610828 ZNF548Q8NEK5 533 aaPredicted RBP13.21□□□□□ -0.29
NEK3-205ENST00000610828 CSGALNACT1Q8TDX6 532 aa13.21□□□□□ -0.29
NEK3-205ENST00000610828 AURKBQ96GD4 344 aaPredicted RBP13.21□□□□□ -0.29
NEK3-205ENST00000610828 VPS50Q96JG6 964 aa13.21□□□□□ -0.29
NEK3-205ENST00000610828 FAM129BQ96TA1 746 aa13.21□□□□□ -0.29
NEK3-205ENST00000610828 ZNF696Q9H7X3 374 aa13.21□□□□□ -0.29
NEK3-205ENST00000610828 RMND5AQ9H871 391 aa13.21□□□□□ -0.29
NEK3-205ENST00000610828 SFXN1Q9H9B4 322 aa13.21□□□□□ -0.29
NEK3-205ENST00000610828 HPS4Q9NQG7 708 aa13.21□□□□□ -0.29
NEK3-205ENST00000610828 VPS29Q9UBQ0 182 aa13.21□□□□□ -0.29
NEK3-205ENST00000610828 PPT2Q9UMR5 302 aa13.21□□□□□ -0.29
NEK3-205ENST00000610828 ELOVL7A1L3X0 281 aa13.21□□□□□ -0.3
NEK3-205ENST00000610828 ANTXRLA6NF34 631 aa13.21□□□□□ -0.3
NEK3-205ENST00000610828 ERN1O75460 977 aaKnown RBP13.21□□□□□ -0.3
NEK3-205ENST00000610828 NELFEP18615 380 aaKnown RBP13.21□□□□□ -0.3
NEK3-205ENST00000610828 PYCR3Q53H96 274 aa13.21□□□□□ -0.3
NEK3-205ENST00000610828 C9orf50Q5SZB4 431 aa13.21□□□□□ -0.3
NEK3-205ENST00000610828 GPR180Q86V85 440 aa13.21□□□□□ -0.3
NEK3-205ENST00000610828 TNIP2Q8NFZ5 429 aa13.21□□□□□ -0.3
NEK3-205ENST00000610828 WDR20Q8TBZ3 569 aa13.21□□□□□ -0.3
NEK3-205ENST00000610828 TESCQ96BS2 214 aa13.21□□□□□ -0.3
NEK3-205ENST00000610828 INPP5KQ9BT40 448 aa13.21□□□□□ -0.3
NEK3-205ENST00000610828 PAIP1Q9H074 479 aaKnown RBP13.21□□□□□ -0.3
NEK3-205ENST00000610828 KCNH6Q9H252 994 aa13.21□□□□□ -0.3
NEK3-205ENST00000610828 TMEM245Q9H330 911 aa13.21□□□□□ -0.3
NEK3-205ENST00000610828 EPHX3Q9H6B9 360 aa13.21□□□□□ -0.3
NEK3-205ENST00000610828 SERHLQ9NQF3 203 aa13.21□□□□□ -0.3
NEK3-205ENST00000610828 SERTM1A2A2V5 107 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 NPIPB8E9PQR5 432 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 EI24O14681 340 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 NPC1O15118 1278 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 ACOX3O15254 700 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 SH3BGRLO75368 114 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 PCNAP12004 261 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 MAPK9P45984 424 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 CSTF3Q12996 717 aaKnown RBP13.2□□□□□ -0.3
NEK3-205ENST00000610828 TSTA3Q13630 321 aaPredicted RBP13.2□□□□□ -0.3
NEK3-205ENST00000610828 FAM98BQ52LJ0 330 aaKnown RBP13.2□□□□□ -0.3
NEK3-205ENST00000610828 SYT12Q8IV01 421 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 SYTL1Q8IYJ3 562 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 TMEM132CQ8N3T6 1108 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 MFSD2AQ8NA29 543 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 CDC26Q8NHZ8 85 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 SUSD6Q92537 303 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 TFAP2CQ92754 450 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 ITCHQ96J02 903 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 CCDC115Q96NT0 180 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 ANKRD60Q9BZ19 345 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 SGK2Q9HBY8 427 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 THG1LQ9NWX6 298 aaKnown RBP13.2□□□□□ -0.3
NEK3-205ENST00000610828 ADGRE2Q9UHX3 823 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 TRBV5-3A0A0A0MS03 114 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 ENO4A6NNW6 628 aa13.2□□□□□ -0.3
NEK3-205ENST00000610828 PLOD2O00469 737 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms