RNA–Protein interactions for RNA: ENST00000610488.4

PPHLN1-223, Transcript of periphilin 1, human

TSL 5 BASIC

Gene PPHLN1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPHLN1-223	ENST00000610488	RASGEF1A	Q8N9B8	481 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	AGR3	Q8TD06	166 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ZDHHC1	Q8WTX9	485 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	L3HYPDH	Q96EM0	354 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ERVK-6	Q9BXR3	956 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	GSDMC	Q9BYG8	508 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	SHCBP1L	Q9BZQ2	653 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CNOT6	Q9ULM6	557 aa	Known RBP	13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	SUFU	Q9UMX1	484 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	RHPN2P1	A8MT19	583 aa		13.17	□□□□□ -0.3
PPHLN1-223	ENST00000610488	KPNA5	O15131	536 aa		13.17	□□□□□ -0.3
PPHLN1-223	ENST00000610488	SNX2	O60749	519 aa		13.17	□□□□□ -0.3
PPHLN1-223	ENST00000610488	DCTN3	O75935	186 aa		13.17	□□□□□ -0.3
PPHLN1-223	ENST00000610488	SUPT7L	O94864	414 aa		13.17	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ZIC2	O95409	532 aa	Predicted RBP	13.17	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CEACAM5	P06731	702 aa		13.17	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ITIH1	P19827	911 aa		13.17	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CCKBR	P32239	447 aa		13.17	□□□□□ -0.3
PPHLN1-223	ENST00000610488	MAPK10	P53779	464 aa		13.17	□□□□□ -0.3
PPHLN1-223	ENST00000610488	PRKAA1	Q13131	559 aa		13.17	□□□□□ -0.3
PPHLN1-223	ENST00000610488	BOP1	Q14137	746 aa	Known RBP	13.17	□□□□□ -0.3
PPHLN1-223	ENST00000610488	UNC50	Q53HI1	259 aa		13.17	□□□□□ -0.3
PPHLN1-223	ENST00000610488	OGFOD3	Q6PK18	319 aa		13.17	□□□□□ -0.3
PPHLN1-223	ENST00000610488	RPS27L	Q71UM5	84 aa	Known RBP	13.17	□□□□□ -0.3
PPHLN1-223	ENST00000610488	TRIM74	Q86UV6	250 aa		13.17	□□□□□ -0.3
PPHLN1-223	ENST00000610488	BEND7	Q8N7W2	519 aa	Predicted RBP	13.17	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ELMO1	Q92556	727 aa		13.17	□□□□□ -0.3
PPHLN1-223	ENST00000610488	SIKE1	Q9BRV8	207 aa		13.17	□□□□□ -0.3
PPHLN1-223	ENST00000610488	TEX101	Q9BY14	249 aa		13.17	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ZCCHC2	Q9C0B9	1178 aa	Known RBP	13.17	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ZMYND15	Q9H091	742 aa		13.17	□□□□□ -0.3
PPHLN1-223	ENST00000610488	UTP6	Q9NYH9	597 aa	Known RBP	13.17	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CD274	Q9NZQ7	290 aa		13.17	□□□□□ -0.3
PPHLN1-223	ENST00000610488	TMCO1	Q9UM00	188 aa		13.17	□□□□□ -0.3
PPHLN1-223	ENST00000610488	NUDT21	O43809	227 aa	Known RBP	13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	SNUPN	O95149	360 aa	Known RBP	13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	SIX3	O95343	332 aa	Predicted RBP	13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	S100B	P04271	92 aa	Predicted RBP	13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ENO3	P13929	434 aa	Predicted RBP	13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	PNLIP	P16233	465 aa		13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ALDH4A1	P30038	563 aa		13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	PPM1F	P49593	454 aa	Predicted RBP	13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	RPL14	P50914	215 aa	Known RBP	13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CTSC	P53634	463 aa		13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	OR1D5	P58170	312 aa		13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	HSPA14	Q0VDF9	509 aa		13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	LY6D	Q14210	128 aa		13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	SETDB1	Q15047	1291 aa		13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	TGFBI	Q15582	683 aa		13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	PLEKHS1	Q5SXH7	462 aa		13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	TMEM220	Q6QAJ8	160 aa		13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	SBSN	Q6UWP8	590 aa		13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CYHR1	Q6ZMK1	362 aa		13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	FRMD7	Q6ZUT3	714 aa		13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	NRROS	Q86YC3	692 aa		13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	GPBAR1	Q8TDU6	330 aa		13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CCT6B	Q92526	530 aa		13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	WWP1	Q9H0M0	922 aa		13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	GSTO2	Q9H4Y5	243 aa		13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	EML4	Q9HC35	981 aa	Known RBP	13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	NUDT4	Q9NZJ9	180 aa		13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	TAAR2	Q9P1P5	351 aa		13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	HEY2	Q9UBP5	337 aa		13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ZDHHC2	Q9UIJ5	367 aa		13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ADAMTS6	Q9UKP5	1117 aa		13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ANKRD12	Q6UB98	2062 aa		13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	BOD1L1	Q8NFC6	3051 aa		13.16	□□□□□ -0.3
PPHLN1-223	ENST00000610488	LRRC14B	A6NHZ5	514 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	STX16-NPEPL1	H3BU86	382 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488		K7ENP7	123 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	EIF3F	O00303	357 aa	Predicted RBP	13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	STX16	O14662	325 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	KLK8	O60259	260 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CDK14	O94921	469 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ALOX15	P16050	662 aa	Predicted RBP	13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	EEF1D	P29692	281 aa	Known RBP	13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	PRLHR	P49683	370 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ALDH18A1	P54886	795 aa	Known RBP	13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	GTF2H3	Q13889	308 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	GBX1	Q14549	363 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	FBXO48	Q5FWF7	155 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	INO80C	Q6PI98	192 aa	Predicted RBP	13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	TMPRSS9	Q7Z410	1059 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	MAVS	Q7Z434	540 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	YTHDF3	Q7Z739	585 aa	Known RBP	13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ADGRG6	Q86SQ4	1221 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ZNF605	Q86T29	641 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	FITM2	Q8N6M3	262 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	PATE1	Q8WXA2	126 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	LRRC37B	Q96QE4	947 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CCNL2	Q96S94	520 aa	Predicted RBP	13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CMKLR1	Q99788	373 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	OR2AG1	Q9H205	316 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	SEMA6C	Q9H3T2	930 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	RDH14	Q9HBH5	336 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	TRIM39	Q9HCM9	518 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	FAM8A1	Q9UBU6	413 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	HAO1	Q9UJM8	370 aa		13.15	□□□□□ -0.3
PPHLN1-223	ENST00000610488	TMEM98	Q9Y2Y6	226 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms