RNA–Protein interactions for RNA: ENST00000606161.1

ZEB1-224, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 3

Gene ZEB1, Length 482 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-224ENST00000606161 SNRNP40Q96DI7 357 aaKnown RBP3.17□□□□□ -1.9
ZEB1-224ENST00000606161 HMCESQ96FZ2 354 aa3.17□□□□□ -1.9
ZEB1-224ENST00000606161 PGM2Q96G03 612 aa3.17□□□□□ -1.9
ZEB1-224ENST00000606161 CPNE1Q99829 537 aa3.17□□□□□ -1.9
ZEB1-224ENST00000606161 SSX3Q99909 188 aa3.17□□□□□ -1.9
ZEB1-224ENST00000606161 SCNM1Q9BWG6 230 aa3.17□□□□□ -1.9
ZEB1-224ENST00000606161 TEX13BQ9BXU2 312 aa3.17□□□□□ -1.9
ZEB1-224ENST00000606161 TRIM7Q9C029 511 aa3.17□□□□□ -1.9
ZEB1-224ENST00000606161 TRIM6Q9C030 488 aaPredicted RBP3.17□□□□□ -1.9
ZEB1-224ENST00000606161 NT5C3AQ9H0P0 336 aa3.17□□□□□ -1.9
ZEB1-224ENST00000606161 RAB17Q9H0T7 212 aa3.17□□□□□ -1.9
ZEB1-224ENST00000606161 ATG10Q9H0Y0 220 aa3.17□□□□□ -1.9
ZEB1-224ENST00000606161 PPIL3Q9H2H8 161 aaKnown RBP3.17□□□□□ -1.9
ZEB1-224ENST00000606161 CUEDC2Q9H467 287 aa3.17□□□□□ -1.9
ZEB1-224ENST00000606161 TBC1D17Q9HA65 648 aa3.17□□□□□ -1.9
ZEB1-224ENST00000606161 DDX4Q9NQI0 724 aaKnown RBP3.17□□□□□ -1.9
ZEB1-224ENST00000606161 SLC35D1Q9NTN3 355 aa3.17□□□□□ -1.9
ZEB1-224ENST00000606161 TMEM45AQ9NWC5 275 aa3.17□□□□□ -1.9
ZEB1-224ENST00000606161 CGNQ9P2M7 1197 aaKnown RBP3.17□□□□□ -1.9
ZEB1-224ENST00000606161 SLC9A2Q9UBY0 812 aa3.17□□□□□ -1.9
ZEB1-224ENST00000606161 TRIM10Q9UDY6 481 aa3.17□□□□□ -1.9
ZEB1-224ENST00000606161 KCNN3Q9UGI6 736 aa3.17□□□□□ -1.9
ZEB1-224ENST00000606161 CTNNA3Q9UI47 895 aa3.17□□□□□ -1.9
ZEB1-224ENST00000606161 FBXL2Q9UKC9 423 aa3.17□□□□□ -1.9
ZEB1-224ENST00000606161 EXOC7Q9UPT5 735 aa3.17□□□□□ -1.9
ZEB1-224ENST00000606161 WDR37Q9Y2I8 494 aa3.17□□□□□ -1.9
ZEB1-224ENST00000606161 TCF20Q9UGU0 1960 aaKnown RBP3.17□□□□□ -1.9
ZEB1-224ENST00000606161 FAM135BQ49AJ0 1406 aa3.17□□□□□ -1.9
ZEB1-224ENST00000606161 PTPRMP28827 1452 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 ATP7BP35670 1465 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 A0A1W2PP64 1363 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 TULP4Q9NRJ4 1543 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 LY6G6EA0A0G2JKS1 128 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 ILVBLA1L0T0 632 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 GOLGA6L9A6NEM1 432 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 C2CD4BA6NLJ0 364 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 CTDSPLO15194 276 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 PLPP2O43688 288 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 BUD23O43709 281 aaKnown RBP3.16□□□□□ -1.9
ZEB1-224ENST00000606161 GMFGO60234 142 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 SELENOFO60613 162 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 ZNF217O75362 1048 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 CREG1O75629 220 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 GLCEO94923 617 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 EPN2O95208 641 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 ABHD2P08910 425 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 RPS2P15880 293 aaKnown RBP3.16□□□□□ -1.9
ZEB1-224ENST00000606161 HRH2P25021 359 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 AZGP1P25311 298 aaKnown RBP3.16□□□□□ -1.9
ZEB1-224ENST00000606161 ITGA3P26006 1051 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 MARCKSP29966 332 aaPredicted RBP3.16□□□□□ -1.9
ZEB1-224ENST00000606161 DCTDP32321 178 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 MAGEA4P43358 317 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 IER3P46695 156 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 LHX1P48742 406 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 ENTPD1P49961 510 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 MFAP3P55082 362 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 CD81P60033 236 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 POLR2LP62875 67 aaKnown RBP3.16□□□□□ -1.9
ZEB1-224ENST00000606161 SLC34A1Q06495 639 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 ARHGAP1Q07960 439 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 TRA2AQ13595 282 aaKnown RBP eCLIP3.16□□□□□ -1.9
ZEB1-224ENST00000606161 CUL3Q13618 768 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 CARTPTQ16568 116 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 CTF1Q16619 201 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 SYT16Q17RD7 645 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 WSCD2Q2TBF2 565 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 KLHL26Q53HC5 615 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 PPP6R3Q5H9R7 873 aaPredicted RBP3.16□□□□□ -1.9
ZEB1-224ENST00000606161 GCNT6Q5T4J0 391 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 RAET1GQ6H3X3 334 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 PRR27Q6MZM9 219 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 C11orf63Q6NUN7 778 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 SLC27A1Q6PCB7 646 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 SHC4Q6S5L8 630 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 ZNF793Q6ZN11 406 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.16□□□□□ -1.9
ZEB1-224ENST00000606161 TAF8Q7Z7C8 310 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 COMMD2Q86X83 199 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 RASGEF1CQ8N431 466 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 NANOGP1Q8N7R0 232 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 SLC44A5Q8NCS7 719 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 GMCL1P1Q8NEA9 526 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 SLC24A4Q8NFF2 622 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 C16orf52Q8NHV5 167 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.16□□□□□ -1.9
ZEB1-224ENST00000606161 U2AF1L4Q8WU68 220 aaKnown RBP3.16□□□□□ -1.9
ZEB1-224ENST00000606161 CCDC107Q8WV48 283 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 TAAR8Q969N4 342 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 ERGIC1Q969X5 290 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 TMEM186Q96B77 213 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 SGF29Q96ES7 293 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 C14orf79Q96F83 325 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 LINGO1Q96FE5 620 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 THOC1Q96FV9 657 aaKnown RBP3.16□□□□□ -1.9
ZEB1-224ENST00000606161 LRFN5Q96NI6 719 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 MUS81Q96NY9 551 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 MYADMQ96S97 322 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 C17orf62Q9BQA9 187 aa3.16□□□□□ -1.9
ZEB1-224ENST00000606161 WDR83Q9BRX9 315 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms