RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 PCDHB1Q9Y5F3 818 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 GABRR3A8MPY1 467 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 IFNA5P01569 189 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 ACOT2P49753 483 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 ZNF169Q14929 603 aaPredicted RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 ABRAXAS2Q15018 415 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 OTUD1Q5VV17 481 aaPredicted RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 FAM198BQ6UWH4 519 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 SGK3Q96BR1 496 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 PTCHD1Q96NR3 888 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 TPT1P8Q9HAU6 139 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 SERINC1Q9NRX5 453 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 ETNK2Q9NVF9 386 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 ZFR2Q9UPR6 939 aaKnown RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 L7N2F9 121 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 TREHO43280 583 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 CPNE3O75131 537 aaKnown RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 POP7O75817 140 aaKnown RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 ZNF286BP0CG31 522 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 KCNA6P17658 529 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 ALDH3B1P43353 468 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 SERPINA13PQ6UXR4 307 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 MON1BQ7L1V2 547 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 HTRA1Q92743 480 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 EDARQ9UNE0 448 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 BTNL3Q6UXE8 466 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 PARP8Q8N3A8 854 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.32□□□□□ -1.88
NEB-218ENST00000603639 OR10A6Q8NH74 314 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 SLC41A3Q96GZ6 507 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 NPIPA7E9PJI5 369 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 ARNTLO00327 626 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 PRKYO43930 277 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 NPIPA8P0DM63 369 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 RHCEP18577 417 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 PSMB1P20618 241 aaKnown RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 ALDH4A1P30038 563 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 ZNF41P51814 821 aaPredicted RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 DLX5P56178 289 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 DSG2Q14126 1118 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 SIM2Q14190 667 aaPredicted RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 ZNF460Q14592 562 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 GPRIN3Q6ZVF9 776 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 OR2T12Q8NG77 320 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 OXER1Q8TDS5 423 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 PDLIM5Q96HC4 596 aaKnown RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 OR6C65A6NJZ3 312 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 RASAL1O95294 804 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 ALAS1P13196 640 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 OSTNP61366 133 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 C14orf28Q4W4Y0 310 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 IRF2BP1Q8IU81 584 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 CERS4Q9HA82 394 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 NTN4Q9HB63 628 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 TRIM36Q9NQ86 728 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 TRNAU1APQ9NX07 287 aaKnown RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 PRELID3BQ9Y3B1 194 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 EFCAB7A8K855 629 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 PROS1P07225 676 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 CDK2P24941 298 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 ASAH1Q13510 395 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 SLC25A52Q3SY17 297 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 PHTF2Q8N3S3 785 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 SPATA33Q96N06 139 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 MTERF1Q99551 399 aaKnown RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 SLC32A1Q9H598 525 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 ZNF302Q9NR11 478 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 KIF25Q9UIL4 384 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 FLVCR2Q9UPI3 526 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 NPFFR2Q9Y5X5 522 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 ACEP12821 1306 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 TFP02787 698 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 CD97P48960 835 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 CCNJQ5T5M9 372 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 OFCC1Q8IZS5 231 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 PCSK9Q8NBP7 692 aaKnown RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 GSTCDQ8NEC7 633 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 C2orf49Q9BVC5 232 aaPredicted RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 LMAN2LQ9H0V9 348 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 CDC42EP4Q9H3Q1 356 aaKnown RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 NKIRAS2Q9NYR9 191 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 PRR5-ARHGAP8B1AHC4 643 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 PPEF1O14829 653 aaPredicted RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 SFTPCP11686 197 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 HERVK_113P63132 956 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 SLC7A9P82251 487 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 ARHGAP8P85298 464 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 ARHGAP11AQ6P4F7 1023 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 ADGRF3Q8IZF5 1079 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 CHST4Q8NCG5 386 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 OR6Q1Q8NGQ2 317 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 ZNF587Q96SQ5 575 aaPredicted RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 CCM2Q9BSQ5 444 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 ERVK-6Q9BXR3 956 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 OLAHQ9NV23 265 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 PAQR5Q9NXK6 330 aaPredicted RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 USP17L15C9J2P7 530 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 USP17L13C9JLJ4 530 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 USP17L11C9JVI0 530 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 USP17L18D6R9N7 530 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms