RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 PPP1R14CQ8TAE6 165 aa22.15■■□□□ 1.14
IRF3-227ENST00000600911 LRRC8CQ8TDW0 803 aa22.15■■□□□ 1.14
IRF3-227ENST00000600911 ZFPM2Q8WW38 1151 aa22.15■■□□□ 1.14
IRF3-227ENST00000600911 CCDC74AQ96AQ1 378 aa22.15■■□□□ 1.14
IRF3-227ENST00000600911 CCDC134Q9H6E4 229 aa22.15■■□□□ 1.14
IRF3-227ENST00000600911 CCDC177Q9NQR7 707 aaPredicted RBP22.15■■□□□ 1.14
IRF3-227ENST00000600911 DNAJC11Q9NVH1 559 aa22.15■■□□□ 1.14
IRF3-227ENST00000600911 CUEDC1Q9NWM3 386 aaPredicted RBP22.15■■□□□ 1.14
IRF3-227ENST00000600911 ADAM21Q9UKJ8 722 aa22.15■■□□□ 1.14
IRF3-227ENST00000600911 TNPO3Q9Y5L0 923 aaKnown RBP22.15■■□□□ 1.14
IRF3-227ENST00000600911 COL5A1P20908 1838 aaPredicted RBP22.15■■□□□ 1.14
IRF3-227ENST00000600911 E7EQ34 232 aa22.14■■□□□ 1.14
IRF3-227ENST00000600911 PROB1E7EW31 1015 aa22.14■■□□□ 1.14
IRF3-227ENST00000600911 KLF11O14901 512 aa22.14■■□□□ 1.14
IRF3-227ENST00000600911 B4GAT1O43505 415 aa22.14■■□□□ 1.14
IRF3-227ENST00000600911 ALPPL2P10696 532 aa22.14■■□□□ 1.14
IRF3-227ENST00000600911 FOXA1P55317 472 aa22.14■■□□□ 1.14
IRF3-227ENST00000600911 GNGT1P63211 74 aa22.14■■□□□ 1.14
IRF3-227ENST00000600911 SH3BP2P78314 561 aa22.14■■□□□ 1.14
IRF3-227ENST00000600911 TRAF3Q13114 568 aa22.14■■□□□ 1.14
IRF3-227ENST00000600911 PRAMEF13Q5VWM6 474 aa22.14■■□□□ 1.14
IRF3-227ENST00000600911 CAPN13Q6MZZ7 669 aaPredicted RBP22.14■■□□□ 1.14
IRF3-227ENST00000600911 RGS9BPQ6ZS82 235 aa22.14■■□□□ 1.14
IRF3-227ENST00000600911 SYVN1Q86TM6 617 aa22.14■■□□□ 1.14
IRF3-227ENST00000600911 TRIM73Q86UV7 250 aa22.14■■□□□ 1.14
IRF3-227ENST00000600911 SNX31Q8N9S9 440 aa22.14■■□□□ 1.14
IRF3-227ENST00000600911 SMPDL3AQ92484 453 aa22.14■■□□□ 1.14
IRF3-227ENST00000600911 NEIL2Q969S2 332 aa22.14■■□□□ 1.14
IRF3-227ENST00000600911 KCNA7Q96RP8 456 aa22.14■■□□□ 1.14
IRF3-227ENST00000600911 SLC38A3Q99624 504 aa22.14■■□□□ 1.14
IRF3-227ENST00000600911 CAPS2Q9BXY5 557 aa22.14■■□□□ 1.14
IRF3-227ENST00000600911 IPPKQ9H8X2 491 aa22.14■■□□□ 1.14
IRF3-227ENST00000600911 EVA1BQ9NVM1 165 aa22.14■■□□□ 1.14
IRF3-227ENST00000600911 KLHL20Q9Y2M5 609 aa22.14■■□□□ 1.14
IRF3-227ENST00000600911 UNC13CQ8NB66 2214 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 LILRA5A6NI73 299 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 C4orf47A7E2U8 309 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 TMEM233B4DJY2 109 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 NUDT21O43809 227 aaKnown RBP22.13■■□□□ 1.13
IRF3-227ENST00000600911 GLB1P16278 677 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 CD22P20273 847 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 LSSP48449 732 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 NHLH1Q02575 133 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 CFHR1Q03591 330 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 CFAP157Q5JU67 520 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 CATSPEREQ5SY80 951 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 RBM12BQ8IXT5 1001 aaKnown RBP22.13■■□□□ 1.13
IRF3-227ENST00000600911 Q8N9G6 341 aaPredicted RBP22.13■■□□□ 1.13
IRF3-227ENST00000600911 AGR3Q8TD06 166 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 AGAP11Q8TF27 550 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 ZNF317Q96PQ6 595 aaPredicted RBP22.13■■□□□ 1.13
IRF3-227ENST00000600911 RAB11FIP5Q9BXF6 653 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 SPNS1Q9H2V7 528 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 UCK1Q9HA47 277 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 TMEM9BQ9NQ34 198 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 OR6C2Q9NZP2 312 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 ZDHHC2Q9UIJ5 367 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 PCDHGB2Q9Y5G2 931 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 IGKV1-8A0A0C4DH67 115 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 RHPN2P1A8MT19 583 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 SH3BP5O60239 455 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 SEC24CP53992 1094 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 ERVPABLB-1P60509 514 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 CDC16Q13042 620 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 NR1D2Q14995 579 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 NR0B2Q15466 257 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 RBBP7Q16576 425 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 LETMD1Q6P1Q0 360 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 LRRC34Q8IZ02 419 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 ZNF781Q8N8C0 355 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 PPP4R1Q8TF05 950 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 CNDP1Q96KN2 507 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 OR2A14Q96R47 310 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 MIPEPQ99797 713 aa22.13■■□□□ 1.13
IRF3-227ENST00000600911 CPED1A4D0V7 1026 aa22.12■■□□□ 1.13
IRF3-227ENST00000600911 OR5K3A6NET4 321 aa22.12■■□□□ 1.13
IRF3-227ENST00000600911 TMEM114B3SHH9 223 aa22.12■■□□□ 1.13
IRF3-227ENST00000600911 LRP3O75074 770 aa22.12■■□□□ 1.13
IRF3-227ENST00000600911 KATNA1O75449 491 aa22.12■■□□□ 1.13
IRF3-227ENST00000600911 UBXN7O94888 489 aa22.12■■□□□ 1.13
IRF3-227ENST00000600911 OR4F21O95013 312 aa22.12■■□□□ 1.13
IRF3-227ENST00000600911 GRK2P25098 689 aa22.12■■□□□ 1.13
IRF3-227ENST00000600911 VARSP26640 1264 aaKnown RBP22.12■■□□□ 1.13
IRF3-227ENST00000600911 ALDH4A1P30038 563 aa22.12■■□□□ 1.13
IRF3-227ENST00000600911 LSP1P33241 339 aa22.12■■□□□ 1.13
IRF3-227ENST00000600911 HSD17B2P37059 387 aa22.12■■□□□ 1.13
IRF3-227ENST00000600911 THEMIS2Q5TEJ8 643 aa22.12■■□□□ 1.13
IRF3-227ENST00000600911 CGB2Q6NT52 195 aa22.12■■□□□ 1.13
IRF3-227ENST00000600911 LCTLQ6UWM7 567 aa22.12■■□□□ 1.13
IRF3-227ENST00000600911 CUZD1Q86UP6 607 aa22.12■■□□□ 1.13
IRF3-227ENST00000600911 OR4F6Q8NGB9 312 aa22.12■■□□□ 1.13
IRF3-227ENST00000600911 RAB3IL1Q8TBN0 382 aa22.12■■□□□ 1.13
IRF3-227ENST00000600911 STN1Q9H668 368 aaKnown RBP22.12■■□□□ 1.13
IRF3-227ENST00000600911 SLC6A20Q9NP91 592 aa22.12■■□□□ 1.13
IRF3-227ENST00000600911 PNPOQ9NVS9 261 aa22.12■■□□□ 1.13
IRF3-227ENST00000600911 HRASLS2Q9NWW9 162 aa22.12■■□□□ 1.13
IRF3-227ENST00000600911 ACTR10Q9NZ32 417 aa22.12■■□□□ 1.13
IRF3-227ENST00000600911 COL27A1Q8IZC6 1860 aaPredicted RBP22.12■■□□□ 1.13
IRF3-227ENST00000600911 IGHV1OR21-1A0A087WYE8 117 aa22.11■■□□□ 1.13
IRF3-227ENST00000600911 EME2A4GXA9 379 aaPredicted RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms