RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 A0A1W2PNU3 283 aaPredicted RBP11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 PABPN1LA6NDY0 278 aaKnown RBP11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 RHPN2P1A8MT19 583 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 STX16-NPEPL1H3BU86 382 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 PYCARD-AS1I3L0S3 204 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 MATN2O00339 956 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 STX16O14662 325 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 RRP8O43159 456 aaKnown RBP11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 FKBP9O95302 570 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 SLC16A8O95907 504 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 PROCP04070 461 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 SBK3P0C264 359 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 CDK4P11802 303 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 MYF5P13349 255 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 CCND1P24385 295 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 IMPA1P29218 277 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 ETV4P43268 484 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 BDKRB1P46663 353 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 GLRBP48167 497 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 CFHR1Q03591 330 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 ILKQ13418 452 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 KLHL35Q6PF15 583 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 FRA10AC1Q70Z53 315 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 ZNF605Q86T29 641 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 LRRC56Q8IYG6 542 aaPredicted RBP11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 CACTIN-AS1Q8N1I8 211 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 OR2L8Q8NGY9 312 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 DENND1AQ8TEH3 1009 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 LCN9Q8WX39 176 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 CCDC126Q96EE4 140 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 SLC38A3Q99624 504 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 HGH1Q9BTY7 390 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 CPNE5Q9HCH3 593 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 ARL15Q9NXU5 204 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 EPHA6Q9UF33 1036 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 ICKQ9UPZ9 632 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 ENTPD2Q9Y5L3 495 aa11.27□□□□□ -0.61
CHMP2A-207ENST00000600804 TRBV23OR9-2A0A075B6M9 112 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 PRAMEF33A0A0G2JMD5 474 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 E7ENX8 843 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 CASC3O15234 703 aaKnown RBP11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 SMIM24O75264 130 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 MT-CO3P00414 261 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 DHRS4L1P0CG22 281 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 TAC1P20366 129 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 ATP5F1P24539 256 aaPredicted RBP11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 PNLIPRP1P54315 467 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 ALDH18A1P54886 795 aaKnown RBP11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 NAA20P61599 178 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 TAP2Q03519 686 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 PRKG2Q13237 762 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 BIRC2Q13490 618 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 CCSMST1Q4G0I0 132 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 HSP90B2PQ58FF3 399 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 CDCP2Q5VXM1 449 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 ZYG11AQ6WRX3 759 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 AMIGO1Q86WK6 493 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 SLC22A9Q8IVM8 553 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 OR56A3Q8NH54 315 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 WDR48Q8TAF3 677 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 TCP10LQ8TDR4 215 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 ZNF480Q8WV37 535 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 SMPDL3AQ92484 453 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 NAF1Q96HR8 494 aaKnown RBP11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 SCYL1Q96KG9 808 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 DPYSL5Q9BPU6 564 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 SGPP1Q9BX95 441 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 C1QTNF3Q9BXJ4 246 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 UNKQ9C0B0 810 aaKnown RBP11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 PCBD2Q9H0N5 130 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 CNOT10Q9H9A5 744 aaKnown RBP11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 STOX2Q9P2F5 926 aaPredicted RBP11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 COPG2Q9UBF2 871 aa11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 TSR3Q9UJK0 312 aaKnown RBP11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 TDRKHQ9Y2W6 561 aaKnown RBP11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 TNPO3Q9Y5L0 923 aaKnown RBP11.26□□□□□ -0.61
CHMP2A-207ENST00000600804 IGHV1OR21-1A0A087WYE8 117 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 TMEM120BA0PK00 339 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 OR5K3A6NET4 321 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 SUPT3HB4E1H0 165 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 G3V2L1 256 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 UBXN8O00124 270 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 PRICKLE3O43900 615 aaPredicted RBP11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 SPAG7O75391 227 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 SUPT3HO75486 399 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 UBXN7O94888 489 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 S100BP04271 92 aaPredicted RBP11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 RPA3P35244 121 aaPredicted RBP11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 CAPZBP47756 277 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 SLC6A12P48065 614 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 PRKAA2P54646 552 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 DNAJB13P59910 316 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 DAB2P98082 770 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 PCDH1Q08174 1060 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 MPP2Q14168 576 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 KIR2DS3Q14952 304 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 SETDB1Q15047 1291 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 PLCL1Q15111 1095 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 PCBP2Q15366 365 aaKnown RBP eCLIP11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 ZXDCQ2QGD7 858 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms