RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 PLAGL1Q9UM63 463 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 ERVW-1Q9UQF0 538 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 COL4A4P53420 1690 aaPredicted RBP11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 GRXCR1A8MXD5 290 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 IL7RP16871 459 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 CEBPBP17676 345 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 CLECL1Q8IZS7 167 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 ZNF784Q8NCA9 323 aaPredicted RBP11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 ASZ1Q8WWH4 475 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 ZNF583Q96ND8 569 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 MUS81Q96NY9 551 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 SLC25A37Q9NYZ2 338 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 MOSPD1Q9UJG1 213 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 HS3ST2Q9Y278 367 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 FADS2P1A8MWK0 482 aa11.21□□□□□ -0.61
ARHGEF1-220ENST00000600274 TMX2-CTNND1H3BSU7 103 aa11.21□□□□□ -0.61
ARHGEF1-220ENST00000600274 TCF3P15923 654 aa11.21□□□□□ -0.61
ARHGEF1-220ENST00000600274 AOAHP28039 575 aa11.21□□□□□ -0.61
ARHGEF1-220ENST00000600274 ACSM2AQ08AH3 577 aa11.21□□□□□ -0.61
ARHGEF1-220ENST00000600274 MAD2L1Q13257 205 aaPredicted RBP11.21□□□□□ -0.61
ARHGEF1-220ENST00000600274 HKDC1Q2TB90 917 aa11.21□□□□□ -0.61
ARHGEF1-220ENST00000600274 ACSM2BQ68CK6 577 aa11.21□□□□□ -0.61
ARHGEF1-220ENST00000600274 ELMSAN1Q6PJG2 1045 aa11.21□□□□□ -0.61
ARHGEF1-220ENST00000600274 ADIPOR2Q86V24 386 aa11.21□□□□□ -0.61
ARHGEF1-220ENST00000600274 TFAP2CQ92754 450 aa11.21□□□□□ -0.61
ARHGEF1-220ENST00000600274 CCDC138Q96M89 665 aa11.21□□□□□ -0.61
ARHGEF1-220ENST00000600274 NRTNQ99748 197 aa11.21□□□□□ -0.61
ARHGEF1-220ENST00000600274 SGK2Q9HBY8 427 aa11.21□□□□□ -0.61
ARHGEF1-220ENST00000600274 C16orf96A6NNT2 1141 aa11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 K7ESM1 405 aa11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 SLC16A8O95907 504 aa11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 CTSLP07711 333 aa11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 FCGR1AP12314 374 aa11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 DGKGP49619 791 aa11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 PHC1P78364 1004 aa11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 FOXM1Q08050 763 aa11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 FRG2Q64ET8 278 aa11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 CARM1Q86X55 608 aa11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 CPXM2Q8N436 756 aa11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 FRG2BQ96QU4 278 aa11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 IGFLR1Q9H665 355 aa11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 HSFX1Q9UBD0 423 aa11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 CDC14AQ9UNH5 594 aa11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 ARHGEF33A8MVX0 844 aa11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 H3BNH8 94 aa11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 MMP20O60882 483 aa11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 CYP2A6P11509 494 aaPredicted RBP11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 SDC1P18827 310 aa11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 POLR2IP36954 125 aaKnown RBP11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 ANKDD1AQ495B1 522 aa11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 KLHL35Q6PF15 583 aa11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 TMEM126BQ8IUX1 230 aa11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 NETO1Q8TDF5 533 aa11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 REXO4Q9GZR2 422 aaKnown RBP11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 ZNF696Q9H7X3 374 aa11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 EBF1Q9UH73 591 aa11.21□□□□□ -0.62
ARHGEF1-220ENST00000600274 NUMA1Q14980 2115 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 TRBV5-4A0A0C4DH59 114 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 DYTNA2CJ06 578 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 G3V2T6 193 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 PRAMEF4O60810 478 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 ZBTB11O95625 1053 aaPredicted RBP11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 EPORP19235 508 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 HNF4AP41235 474 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 SLC6A11P48066 632 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 CARTPTQ16568 116 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 NKG7Q16617 165 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 PRAMEF9Q5VWM5 478 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 MICAL3Q7RTP6 2002 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 SZRD1Q7Z422 152 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 C12orf40Q86WS4 652 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 PROSER1Q86XN7 944 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 SGCDQ92629 289 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 KLK6Q92876 244 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 SH3KBP1Q96B97 665 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 IL17FQ96PD4 163 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 SPASTQ9UBP0 616 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 IL36AQ9UHA7 158 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 BAG5Q9UL15 447 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 TMEM98Q9Y2Y6 226 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 TCRBV5S2A0A599 114 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 EVPLLA8MZ36 301 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 ANKRD28O15084 1053 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 SH3BP5O60239 455 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 STATHP02808 62 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 SERPIND1P05546 499 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 TIMP2P16035 220 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 JAK1P23458 1154 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 HTR1EP28566 365 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 VIPR1P32241 457 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 KIR3DL1P43629 444 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 LSM3P62310 102 aaKnown RBP11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 CYP4F2P78329 520 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 TMEM115Q12893 351 aaPredicted RBP11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 SLC14A1Q13336 389 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 ITGADQ13349 1161 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 SIM2Q14190 667 aaPredicted RBP11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 CYP27C1Q4G0S4 372 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 PERM1Q5SV97 790 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 MPP7Q5T2T1 576 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms