RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 RAPH1Q70E73 1250 aa13.24□□□□□ -0.29
VRK3-219ENST00000600137 CCDC91Q7Z6B0 441 aa13.24□□□□□ -0.29
VRK3-219ENST00000600137 IQCKQ8N0W5 287 aa13.24□□□□□ -0.29
VRK3-219ENST00000600137 DNAJC22Q8N4W6 341 aa13.24□□□□□ -0.29
VRK3-219ENST00000600137 OR2L3Q8NG85 312 aa13.24□□□□□ -0.29
VRK3-219ENST00000600137 MDM1Q8TC05 714 aa13.24□□□□□ -0.29
VRK3-219ENST00000600137 EPS8L3Q8TE67 593 aaKnown RBP13.24□□□□□ -0.29
VRK3-219ENST00000600137 SLC22A18Q96BI1 424 aa13.24□□□□□ -0.29
VRK3-219ENST00000600137 ATG10Q9H0Y0 220 aa13.24□□□□□ -0.29
VRK3-219ENST00000600137 UTP6Q9NYH9 597 aaKnown RBP13.24□□□□□ -0.29
VRK3-219ENST00000600137 PISDQ9UG56 409 aa13.24□□□□□ -0.29
VRK3-219ENST00000600137 PCDHGA3Q9Y5H0 932 aa13.24□□□□□ -0.29
VRK3-219ENST00000600137 IKBKGQ9Y6K9 419 aa13.24□□□□□ -0.29
VRK3-219ENST00000600137 CELSR3Q9NYQ7 3312 aa13.24□□□□□ -0.29
VRK3-219ENST00000600137 ZZEF1O43149 2961 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 ACACAQ13085 2346 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 SEC16AO15027 2179 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 SDK2Q58EX2 2172 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 A0A1W2PPM1 405 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 TAF4O00268 1085 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 NRP2O60462 931 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 KRT37O76014 449 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 TNFSF15O95150 251 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 GUCA1CO95843 209 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 CTSBP07858 339 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 SBK3P0C264 359 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 MSL3P1P0C860 447 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 EBLN1P0CF75 366 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 NPPBP16860 134 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 TFEBP19484 476 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 MAGP20916 626 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 MLLT3P42568 568 aaPredicted RBP13.23□□□□□ -0.29
VRK3-219ENST00000600137 PRDX1Q06830 199 aaKnown RBP13.23□□□□□ -0.29
VRK3-219ENST00000600137 NAE1Q13564 534 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 SF1Q15637 639 aaKnown RBP13.23□□□□□ -0.29
VRK3-219ENST00000600137 C18orf21Q32NC0 220 aaPredicted RBP13.23□□□□□ -0.29
VRK3-219ENST00000600137 FOXR1Q6PIV2 292 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 FIGLAQ6QHK4 219 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 CDHR3Q6ZTQ4 885 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 ADAMTSL2Q86TH1 951 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 KLHDC8AQ8IYD2 350 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 SYTL1Q8IYJ3 562 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 USP7Q93009 1102 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 RHBDF1Q96CC6 855 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 ZNF501Q96CX3 271 aaPredicted RBP13.23□□□□□ -0.29
VRK3-219ENST00000600137 OR4K3Q96R72 315 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 MIPEPQ99797 713 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 CCDC77Q9BR77 488 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 TMEM109Q9BVC6 243 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 ACAT2Q9BWD1 397 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 B3GNT4Q9C0J1 378 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 ALG9Q9H6U8 611 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 SYNPO2LQ9H987 977 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 NMRAL1Q9HBL8 299 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 SLC6A20Q9NP91 592 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 ARL15Q9NXU5 204 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 PSMC3IPQ9P2W1 217 aaPredicted RBP13.23□□□□□ -0.29
VRK3-219ENST00000600137 SH2B3Q9UQQ2 575 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 PCDHB11Q9Y5F2 797 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 B3GALT1Q9Y5Z6 326 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 LAMA5O15230 3695 aa13.23□□□□□ -0.29
VRK3-219ENST00000600137 ANKRD11Q6UB99 2663 aaPredicted RBP13.23□□□□□ -0.29
VRK3-219ENST00000600137 MDC1Q14676 2089 aaKnown RBP13.22□□□□□ -0.29
VRK3-219ENST00000600137 OR2A25A4D2G3 310 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 NVLO15381 856 aaKnown RBP13.22□□□□□ -0.29
VRK3-219ENST00000600137 TLX3O43711 291 aaPredicted RBP13.22□□□□□ -0.29
VRK3-219ENST00000600137 CTSVO60911 334 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 FKBP9O95302 570 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 HIST1H2AGP0C0S8 130 aaPredicted RBP13.22□□□□□ -0.29
VRK3-219ENST00000600137 JMJD7P0C870 316 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 FGF5P12034 268 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 COL6A2P12110 1019 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 HIST1H2ADP20671 130 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 GGT5P36269 586 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 SLCO1A2P46721 670 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 SLC6A12P48065 614 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 MAPK10P53779 464 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 TBPL1P62380 186 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 ACAP2Q15057 778 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 CDKL4Q5MAI5 379 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 BEND6Q5SZJ8 279 aaPredicted RBP13.22□□□□□ -0.29
VRK3-219ENST00000600137 ZNF425Q6IV72 752 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 FBXO42Q6P3S6 717 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 TBC1D1Q86TI0 1168 aaPredicted RBP13.22□□□□□ -0.29
VRK3-219ENST00000600137 GPSM1Q86YR5 675 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 LSMEM2Q8N112 164 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 RAB42Q8N4Z0 105 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 C19orf47Q8N9M1 422 aaKnown RBP13.22□□□□□ -0.29
VRK3-219ENST00000600137 RHEBL1Q8TAI7 183 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 STAG3L4Q8TBR4 150 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 ZUFSPQ96AP4 578 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 PYCR2Q96C36 320 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 NXPE2Q96DL1 559 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 MTBPQ96DY7 904 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 HIST1H2AHQ96KK5 128 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 TAAR9Q96RI9 348 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 HIST1H2AJQ99878 128 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 CTRCQ99895 268 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 TMEM79Q9BSE2 394 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 H2AFJQ9BTM1 129 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms