RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 CDCP2Q5VXM1 449 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 CAPN13Q6MZZ7 669 aaPredicted RBP12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 METTL2BQ6P1Q9 378 aaKnown RBP12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 TMEM71Q6P5X7 295 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 LCTLQ6UWM7 567 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 ZNF574Q6ZN55 896 aaPredicted RBP12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 TAX1BP1Q86VP1 789 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 PLXDC1Q8IUK5 500 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 NCSTNQ92542 709 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 ESAMQ96AP7 390 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 SLC22A18Q96BI1 424 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 AHCYL2Q96HN2 611 aaKnown RBP12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 CD180Q99467 661 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 DPYSL5Q9BPU6 564 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 RTKNQ9BST9 563 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 PITPNM3Q9BZ71 974 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 PCBD2Q9H0N5 130 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 CNOT10Q9H9A5 744 aaKnown RBP12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 KCNK9Q9NPC2 374 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 MED4Q9NPJ6 270 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 DLL3Q9NYJ7 618 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 TMEM9Q9P0T7 183 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 MID2Q9UJV3 735 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 ATXN7L1Q9ULK2 861 aaPredicted RBP12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 PCDHB11Q9Y5F2 797 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 KLK4Q9Y5K2 254 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 TNPO3Q9Y5L0 923 aaKnown RBP12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 GSAPA4D1B5 854 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 LRRC14BA6NHZ5 514 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 ISM1B1AKI9 464 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 D6RAR5 112 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 GIPC1O14908 333 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 KCNK5O95279 499 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 FKBP9O95302 570 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 SIX3O95343 332 aaPredicted RBP12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 RPS17P08708 135 aaKnown RBP12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 FTH1P19P0C7X4 201 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 NPPBP16860 134 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 EPORP19235 508 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 PSMB5P28074 263 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 LSSP48449 732 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 HSPA7P48741 367 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 NOVA1P51513 510 aaKnown RBP12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 WDR4P57081 412 aaKnown RBP12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 DNAJB13P59910 316 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 SIM1P81133 766 aaPredicted RBP12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 INSM1Q01101 510 aaPredicted RBP12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 PRDX1Q06830 199 aaKnown RBP12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 ZFP36L1Q07352 338 aaKnown RBP12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 PRAMEF13Q5VWM6 474 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 ARMC6Q6NXE6 501 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 IRGCQ6NXR0 463 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 SPESP1Q6UW49 350 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 LRRC70Q7Z2Q7 622 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 THOC6Q86W42 341 aaKnown RBP12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 SLC22A9Q8IVM8 553 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 CARFQ8N187 725 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 OR2L3Q8NG85 312 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 OR4D9Q8NGE8 314 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 OR6Y1Q8NGX8 325 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 CCDC126Q96EE4 140 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 PHF21BQ96EK2 531 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 L3HYPDHQ96EM0 354 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 MED8Q96G25 268 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 ZDHHC12Q96GR4 267 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 PPM1MQ96MI6 270 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 GFM1Q96RP9 751 aaKnown RBP12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 MIPEPQ99797 713 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 OXSMQ9NWU1 459 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 TAC3Q9UHF0 121 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 SLC22A14Q9Y267 594 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 ASXL3Q9C0F0 2248 aa12.2□□□□□ -0.46
CHMP2A-206ENST00000600118 IGKV1-8A0A0C4DH67 115 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 TLCD2A6NGC4 264 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 H3BQF6 201 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 K7EPI3 171 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 E2F3O00716 465 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 TOX3O15405 576 aaPredicted RBP12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 WDR47O94967 919 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 BPGMP07738 259 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 THRAP10827 490 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 IMPDH1P20839 514 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 KCNA4P22459 653 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 EEF1DP29692 281 aaKnown RBP12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 ALDH3A1P30838 453 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 SERPINB4P48594 390 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 PDX1P52945 283 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 HERVK_113P63132 956 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 YBX1P67809 324 aaKnown RBP12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 ABATP80404 500 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 PCDH1Q08174 1060 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 SPIDRQ14159 915 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 ZNF678Q5SXM1 525 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 ICE2Q659A1 982 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 PRSS42Q7Z5A4 293 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 TRIM73Q86UV7 250 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 C10orf107Q8IVU9 208 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 SLITRK4Q8IW52 837 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 FAM20CQ8IXL6 584 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 CCDC63Q8NA47 563 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms