RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 OR2A1Q8NGT9 310 aa27.11■■□□□ 1.93
SSBP4-206ENST00000599699 CT55Q8WUE5 264 aa27.11■■□□□ 1.93
SSBP4-206ENST00000599699 ZNF480Q8WV37 535 aa27.11■■□□□ 1.93
SSBP4-206ENST00000599699 SEC14L1Q92503 715 aa27.11■■□□□ 1.93
SSBP4-206ENST00000599699 SPRTNQ9H040 489 aaPredicted RBP27.11■■□□□ 1.93
SSBP4-206ENST00000599699 RHOJQ9H4E5 214 aa27.11■■□□□ 1.93
SSBP4-206ENST00000599699 ADAMTS6Q9UKP5 1117 aa27.11■■□□□ 1.93
SSBP4-206ENST00000599699 PABPN1LA6NDY0 278 aaKnown RBP27.1■■□□□ 1.93
SSBP4-206ENST00000599699 CXorf49A8MYA2 514 aaPredicted RBP27.1■■□□□ 1.93
SSBP4-206ENST00000599699 ZNF749O43361 778 aa27.1■■□□□ 1.93
SSBP4-206ENST00000599699 GPX6P59796 221 aa27.1■■□□□ 1.93
SSBP4-206ENST00000599699 GPS2Q13227 327 aa27.1■■□□□ 1.93
SSBP4-206ENST00000599699 SP140Q13342 867 aa27.1■■□□□ 1.93
SSBP4-206ENST00000599699 FCRL6Q6DN72 434 aa27.1■■□□□ 1.93
SSBP4-206ENST00000599699 FAM199XQ6PEV8 388 aaPredicted RBP27.1■■□□□ 1.93
SSBP4-206ENST00000599699 MCATQ8IVS2 390 aaKnown RBP27.1■■□□□ 1.93
SSBP4-206ENST00000599699 CTAGE3PQ8IX95 158 aa27.1■■□□□ 1.93
SSBP4-206ENST00000599699 SLC38A9Q8NBW4 561 aa27.1■■□□□ 1.93
SSBP4-206ENST00000599699 STARD8Q92502 1023 aa27.1■■□□□ 1.93
SSBP4-206ENST00000599699 ZUFSPQ96AP4 578 aa27.1■■□□□ 1.93
SSBP4-206ENST00000599699 PARVBQ9HBI1 364 aa27.1■■□□□ 1.93
SSBP4-206ENST00000599699 KCND3Q9UK17 655 aa27.1■■□□□ 1.93
SSBP4-206ENST00000599699 F8A1P23610 371 aa27.09■■□□□ 1.93
SSBP4-206ENST00000599699 GABRA4P48169 554 aa27.09■■□□□ 1.93
SSBP4-206ENST00000599699 TAF1BQ53T94 588 aaPredicted RBP27.09■■□□□ 1.93
SSBP4-206ENST00000599699 ZC3H12BQ5HYM0 836 aaKnown RBP27.09■■□□□ 1.93
SSBP4-206ENST00000599699 THEMIS2Q5TEJ8 643 aa27.09■■□□□ 1.93
SSBP4-206ENST00000599699 CEP112Q8N8E3 955 aa27.09■■□□□ 1.93
SSBP4-206ENST00000599699 IFT81Q8WYA0 676 aa27.09■■□□□ 1.93
SSBP4-206ENST00000599699 VPS39Q96JC1 886 aa27.09■■□□□ 1.93
SSBP4-206ENST00000599699 SLC12A9Q9BXP2 914 aa27.09■■□□□ 1.93
SSBP4-206ENST00000599699 AKIRIN1Q9H9L7 192 aaPredicted RBP27.09■■□□□ 1.93
SSBP4-206ENST00000599699 LRRC4CQ9HCJ2 640 aa27.09■■□□□ 1.93
SSBP4-206ENST00000599699 ZDHHC18Q9NUE0 388 aa27.09■■□□□ 1.93
SSBP4-206ENST00000599699 EURLQ9NYK6 297 aa27.09■■□□□ 1.93
SSBP4-206ENST00000599699 MTRF1LQ9UGC7 380 aaKnown RBP27.09■■□□□ 1.93
SSBP4-206ENST00000599699 DMGDHQ9UI17 866 aaKnown RBP27.09■■□□□ 1.93
SSBP4-206ENST00000599699 PDE10AQ9Y233 779 aa27.09■■□□□ 1.93
SSBP4-206ENST00000599699 MRPS18BQ9Y676 258 aaKnown RBP27.09■■□□□ 1.93
SSBP4-206ENST00000599699 AP1M2Q9Y6Q5 423 aa27.09■■□□□ 1.93
SSBP4-206ENST00000599699 IGSF10Q6WRI0 2623 aa27.08■■□□□ 1.93
SSBP4-206ENST00000599699 TARM1B6A8C7 271 aa27.08■■□□□ 1.93
SSBP4-206ENST00000599699 MEN1O00255 615 aa27.08■■□□□ 1.93
SSBP4-206ENST00000599699 SLC16A5O15375 505 aa27.08■■□□□ 1.93
SSBP4-206ENST00000599699 HBQ1P09105 142 aa27.08■■□□□ 1.93
SSBP4-206ENST00000599699 PRKAR1AP10644 381 aa27.08■■□□□ 1.93
SSBP4-206ENST00000599699 SLC12A2P55011 1212 aa27.08■■□□□ 1.93
SSBP4-206ENST00000599699 ILF2Q12905 390 aaKnown RBP27.08■■□□□ 1.93
SSBP4-206ENST00000599699 DNASE1L3Q13609 305 aa27.08■■□□□ 1.93
SSBP4-206ENST00000599699 NAA25Q14CX7 972 aa27.08■■□□□ 1.93
SSBP4-206ENST00000599699 GLE1Q53GS7 698 aaKnown RBP27.08■■□□□ 1.93
SSBP4-206ENST00000599699 CYS1Q717R9 158 aa27.08■■□□□ 1.93
SSBP4-206ENST00000599699 ZNF655Q8N720 491 aaPredicted RBP27.08■■□□□ 1.93
SSBP4-206ENST00000599699 DLG3Q92796 817 aa27.08■■□□□ 1.93
SSBP4-206ENST00000599699 CCDC138Q96M89 665 aa27.08■■□□□ 1.93
SSBP4-206ENST00000599699 CPNE1Q99829 537 aa27.08■■□□□ 1.93
SSBP4-206ENST00000599699 MRPS30Q9NP92 439 aaKnown RBP27.08■■□□□ 1.93
SSBP4-206ENST00000599699 TAC3Q9UHF0 121 aa27.08■■□□□ 1.93
SSBP4-206ENST00000599699 FAM159BA6NKW6 160 aa27.07■■□□□ 1.92
SSBP4-206ENST00000599699 E7ENX8 843 aa27.07■■□□□ 1.92
SSBP4-206ENST00000599699 ERVH48-1M5A8F1 160 aa27.07■■□□□ 1.92
SSBP4-206ENST00000599699 NKX2-8O15522 239 aa27.07■■□□□ 1.92
SSBP4-206ENST00000599699 ZSCAN9O15535 394 aaPredicted RBP27.07■■□□□ 1.92
SSBP4-206ENST00000599699 CCNDBP1O95273 360 aa27.07■■□□□ 1.92
SSBP4-206ENST00000599699 TSPAN12O95859 305 aa27.07■■□□□ 1.92
SSBP4-206ENST00000599699 CTSBP07858 339 aa27.07■■□□□ 1.92
SSBP4-206ENST00000599699 HIST1H2AGP0C0S8 130 aaPredicted RBP27.07■■□□□ 1.92
SSBP4-206ENST00000599699 HIST1H2ADP20671 130 aa27.07■■□□□ 1.92
SSBP4-206ENST00000599699 STX2P32856 288 aa27.07■■□□□ 1.92
SSBP4-206ENST00000599699 TAS2R39P59534 338 aa27.07■■□□□ 1.92
SSBP4-206ENST00000599699 MC1RQ01726 317 aa27.07■■□□□ 1.92
SSBP4-206ENST00000599699 TAP2Q03519 686 aa27.07■■□□□ 1.92
SSBP4-206ENST00000599699 C16orf46Q6P387 395 aa27.07■■□□□ 1.92
SSBP4-206ENST00000599699 TLDC1Q6P9B6 456 aa27.07■■□□□ 1.92
SSBP4-206ENST00000599699 DSELQ8IZU8 1212 aa27.07■■□□□ 1.92
SSBP4-206ENST00000599699 FBF1Q8TES7 1133 aa27.07■■□□□ 1.92
SSBP4-206ENST00000599699 HIST1H2AHQ96KK5 128 aa27.07■■□□□ 1.92
SSBP4-206ENST00000599699 LRFN5Q96NI6 719 aa27.07■■□□□ 1.92
SSBP4-206ENST00000599699 HIST1H2AJQ99878 128 aa27.07■■□□□ 1.92
SSBP4-206ENST00000599699 H2AFJQ9BTM1 129 aa27.07■■□□□ 1.92
SSBP4-206ENST00000599699 DPH7Q9BTV6 452 aa27.07■■□□□ 1.92
SSBP4-206ENST00000599699 PCMTD2Q9NV79 361 aa27.07■■□□□ 1.92
SSBP4-206ENST00000599699 C21orf140B9A014 251 aa27.06■■□□□ 1.92
SSBP4-206ENST00000599699 IMPA1P29218 277 aa27.06■■□□□ 1.92
SSBP4-206ENST00000599699 YBX1P67809 324 aaKnown RBP27.06■■□□□ 1.92
SSBP4-206ENST00000599699 ZNF460Q14592 562 aa27.06■■□□□ 1.92
SSBP4-206ENST00000599699 CEP128Q6ZU80 1094 aa27.06■■□□□ 1.92
SSBP4-206ENST00000599699 PPM1NQ8N819 430 aa27.06■■□□□ 1.92
SSBP4-206ENST00000599699 SELENOSQ9BQE4 189 aa27.06■■□□□ 1.92
SSBP4-206ENST00000599699 TRIM54Q9BYV2 358 aa27.06■■□□□ 1.92
SSBP4-206ENST00000599699 CHST8Q9H2A9 424 aa27.06■■□□□ 1.92
SSBP4-206ENST00000599699 STOX2Q9P2F5 926 aaPredicted RBP27.06■■□□□ 1.92
SSBP4-206ENST00000599699 MTO1Q9Y2Z2 717 aaKnown RBP27.06■■□□□ 1.92
SSBP4-206ENST00000599699 SNRNP200O75643 2136 aaKnown RBP27.05■■□□□ 1.92
SSBP4-206ENST00000599699 ATXN8OSP0DMR3 200 aa27.05■■□□□ 1.92
SSBP4-206ENST00000599699 ZNF37AP17032 561 aaPredicted RBP27.05■■□□□ 1.92
SSBP4-206ENST00000599699 RORAP35398 523 aa27.05■■□□□ 1.92
SSBP4-206ENST00000599699 GP5P40197 560 aa27.05■■□□□ 1.92
SSBP4-206ENST00000599699 RPS15P62841 145 aaKnown RBP27.05■■□□□ 1.92
SSBP4-206ENST00000599699 COL9A2Q14055 689 aaPredicted RBP27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms