RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 IGHV5-51A0A0C4DH38 117 aa15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 A0A1W2PPV9 198 aa15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 KIF1CO43896 1103 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 JMJD7P0C870 316 aa15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 MPSTP25325 297 aa15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 PEBP1P30086 187 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 SLCO1A2P46721 670 aa15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 CCT5P48643 541 aa15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 DLG1Q12959 904 aa15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 C16orf72Q14CZ0 275 aa15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 OR4D1Q15615 310 aa15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 SNAP47Q5SQN1 464 aa15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 TMEM164Q5U3C3 297 aa15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 KLHDC8AQ8IYD2 350 aa15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 SPATA6LQ8N4H0 392 aa15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 OR2L3Q8NG85 312 aa15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 PTERQ96BW5 349 aa15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 RHBDF1Q96CC6 855 aa15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 FCRL4Q96PJ5 515 aa15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 TRAPPC9Q96Q05 1148 aa15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 TEFMQ96QE5 360 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 ATOH8Q96SQ7 321 aa15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 MRPL57Q9BQC6 102 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 CAPS2Q9BXY5 557 aa15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 ALG9Q9H6U8 611 aa15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 KLK13Q9UKR3 277 aa15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 IKZF3Q9UKT9 509 aa15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 PCDHGA3Q9Y5H0 932 aa15.97■□□□□ 0.15
SHKBP1-219ENST00000599575 UNC13CQ8NB66 2214 aa15.96■□□□□ 0.15
SHKBP1-219ENST00000599575 NCOR2Q9Y618 2525 aa15.96■□□□□ 0.15
SHKBP1-219ENST00000599575 TLDC2A0PJX2 215 aa15.96■□□□□ 0.15
SHKBP1-219ENST00000599575 FAM149AA5PLN7 773 aa15.96■□□□□ 0.15
SHKBP1-219ENST00000599575 A8MU76 341 aa15.96■□□□□ 0.15
SHKBP1-219ENST00000599575 GUCA1CO95843 209 aa15.96■□□□□ 0.15
SHKBP1-219ENST00000599575 PPP1CAP62136 330 aa15.96■□□□□ 0.15
SHKBP1-219ENST00000599575 TBPL1P62380 186 aa15.96■□□□□ 0.15
SHKBP1-219ENST00000599575 IRF9Q00978 393 aa15.96■□□□□ 0.15
SHKBP1-219ENST00000599575 MC2RQ01718 297 aa15.96■□□□□ 0.15
SHKBP1-219ENST00000599575 THEMIS2Q5TEJ8 643 aa15.96■□□□□ 0.15
SHKBP1-219ENST00000599575 ICE2Q659A1 982 aa15.96■□□□□ 0.15
SHKBP1-219ENST00000599575 LCTLQ6UWM7 567 aa15.96■□□□□ 0.15
SHKBP1-219ENST00000599575 RCBTB1Q8NDN9 531 aa15.96■□□□□ 0.15
SHKBP1-219ENST00000599575 OR2W6PQ8NHA6 318 aa15.96■□□□□ 0.15
SHKBP1-219ENST00000599575 DDA1Q9BW61 102 aa15.96■□□□□ 0.15
SHKBP1-219ENST00000599575 MRPL46Q9H2W6 279 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-219ENST00000599575 FANCEQ9HB96 536 aa15.96■□□□□ 0.15
SHKBP1-219ENST00000599575 SIDT1Q9NXL6 827 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-219ENST00000599575 CD274Q9NZQ7 290 aa15.96■□□□□ 0.15
SHKBP1-219ENST00000599575 CIDEBQ9UHD4 219 aa15.96■□□□□ 0.15
SHKBP1-219ENST00000599575 SNX7Q9UNH6 387 aa15.96■□□□□ 0.15
SHKBP1-219ENST00000599575 PCDHGA7Q9Y5G6 932 aa15.96■□□□□ 0.15
SHKBP1-219ENST00000599575 TNPO3Q9Y5L0 923 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-219ENST00000599575 KNTC1P50748 2209 aa15.96■□□□□ 0.15
SHKBP1-219ENST00000599575 SLC9B1P1A6NJY1 282 aa15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 GLRA3O75311 464 aa15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 RBMS1P29558 406 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 CLDN6P56747 220 aa15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 ERVPABLB-1P60509 514 aa15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 NAE1Q13564 534 aa15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 FASTKQ14296 549 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 TECRLQ5HYJ1 363 aa15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 ZC3H12BQ5HYM0 836 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 PRAMEF13Q5VWM6 474 aa15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 SH2D5Q6ZV89 423 aa15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 BMPERQ8N8U9 685 aa15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 C19orf47Q8N9M1 422 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 ALKBH8Q96BT7 664 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 SLC46A1Q96NT5 459 aa15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 TAAR9Q96RI9 348 aa15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 STMN4Q9H169 189 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 MRPS30Q9NP92 439 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 ENAMQ9NRM1 1142 aa15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 PCMTD2Q9NV79 361 aa15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 SOHLH2Q9NX45 425 aa15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 MKS1Q9NXB0 559 aa15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 DKK4Q9UBT3 224 aa15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 TAC3Q9UHF0 121 aa15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 PTBP2Q9UKA9 531 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 SATB2Q9UPW6 733 aa15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 KCNE2Q9Y6J6 123 aa15.95■□□□□ 0.14
SHKBP1-219ENST00000599575 KRT87PA6NCN2 255 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 TRABD2BA6NFA1 517 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 SMIM23A6NLE4 172 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 NVLO15381 856 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 KLK8O60259 260 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 STK16O75716 305 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 PYGBP11216 843 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 ST6GAL1P15907 406 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 NPPBP16860 134 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 CD82P27701 267 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 CRHR1P34998 444 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 GRIA3P42263 894 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 SLC6A12P48065 614 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 SEPHS1P49903 392 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 ALDH18A1P54886 795 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 GABREP78334 506 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 ZNF844Q08AG5 666 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 PTCHD3Q3KNS1 767 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 KRT71Q3SY84 523 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 C3orf38Q5JPI3 329 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms