RNA–Protein interactions for RNA: ENST00000599040.5

FARP1-226, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-226ENST00000599040 EXT2Q93063 718 aa9.12□□□□□ -0.95
FARP1-226ENST00000599040 FAM136AQ96C01 138 aa9.12□□□□□ -0.95
FARP1-226ENST00000599040 SGF29Q96ES7 293 aa9.12□□□□□ -0.95
FARP1-226ENST00000599040 FAR2Q96K12 515 aa9.12□□□□□ -0.95
FARP1-226ENST00000599040 CNDP1Q96KN2 507 aa9.12□□□□□ -0.95
FARP1-226ENST00000599040 SLC38A3Q99624 504 aa9.12□□□□□ -0.95
FARP1-226ENST00000599040 CCM2Q9BSQ5 444 aa9.12□□□□□ -0.95
FARP1-226ENST00000599040 MECRQ9BV79 373 aa9.12□□□□□ -0.95
FARP1-226ENST00000599040 ILKAPQ9H0C8 392 aaPredicted RBP9.12□□□□□ -0.95
FARP1-226ENST00000599040 C12orf65Q9H3J6 166 aaKnown RBP9.12□□□□□ -0.95
FARP1-226ENST00000599040 EPB41L1Q9H4G0 881 aa9.12□□□□□ -0.95
FARP1-226ENST00000599040 RABEP2Q9H5N1 569 aa9.12□□□□□ -0.95
FARP1-226ENST00000599040 RDH14Q9HBH5 336 aa9.12□□□□□ -0.95
FARP1-226ENST00000599040 TRIM39Q9HCM9 518 aa9.12□□□□□ -0.95
FARP1-226ENST00000599040 NUDT4Q9NZJ9 180 aa9.12□□□□□ -0.95
FARP1-226ENST00000599040 CD274Q9NZQ7 290 aa9.12□□□□□ -0.95
FARP1-226ENST00000599040 ARL2BPQ9Y2Y0 163 aa9.12□□□□□ -0.95
FARP1-226ENST00000599040 TMEM98Q9Y2Y6 226 aa9.12□□□□□ -0.95
FARP1-226ENST00000599040 USH1CQ9Y6N9 552 aa9.12□□□□□ -0.95
FARP1-226ENST00000599040 SPTA1P02549 2419 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 IGHV1OR21-1A0A087WYE8 117 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 PRAMEF33A0A0G2JMD5 474 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 OR5K4A6NMS3 321 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 G3V2L1 256 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 LIN7AO14910 233 aaPredicted RBP9.11□□□□□ -0.95
FARP1-226ENST00000599040 INPP4BO15327 924 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 SLC16A5O15375 505 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 GPR39O43194 453 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 B4GAT1O43505 415 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 ZBTB14O43829 449 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 SNX3O60493 162 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 PRAMEF10O60809 474 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 FUCA1P04066 466 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 ITGB2P05107 769 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 FGF3P11487 239 aaPredicted RBP9.11□□□□□ -0.95
FARP1-226ENST00000599040 ITIH1P19827 911 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 MAP4P27816 1152 aaKnown RBP9.11□□□□□ -0.95
FARP1-226ENST00000599040 CD1CP29017 333 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 RAB15P59190 212 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 PRKAA1Q13131 559 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 SP140Q13342 867 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 SQSTM1Q13501 440 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 BOP1Q14137 746 aaKnown RBP9.11□□□□□ -0.95
FARP1-226ENST00000599040 RCN2Q14257 317 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 ZSCAN26Q16670 478 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 BCL7AQ4VC05 210 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 TTC23LQ6PF05 361 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 TMEM220Q6QAJ8 160 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 DET1Q7L5Y6 550 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 ISCA2Q86U28 154 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 SLC9B2Q86UD5 537 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 TRIM74Q86UV6 250 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 TCAIMQ8N3R3 496 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 ZNF843Q8N446 348 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 SPATA6LQ8N4H0 392 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 GBP7Q8N8V2 638 aaPredicted RBP9.11□□□□□ -0.95
FARP1-226ENST00000599040 PIWIL2Q8TC59 973 aaKnown RBP9.11□□□□□ -0.95
FARP1-226ENST00000599040 EEF1AKMT1Q8WVE0 214 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 ANKRD49Q8WVL7 239 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 TTC9Q92623 222 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 USP7Q93009 1102 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 MED8Q96G25 268 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 SEC16BQ96JE7 1060 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 CCDC74BQ96LY2 380 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 GPR78Q96P69 363 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 TAAR9Q96RI9 348 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 EGFL8Q99944 293 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 NUDT22Q9BRQ3 303 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 ARHGAP9Q9BRR9 750 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.11□□□□□ -0.95
FARP1-226ENST00000599040 ASPSCR1Q9BZE9 553 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 WWP1Q9H0M0 922 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 SEMA6CQ9H3T2 930 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 MRGBPQ9NV56 204 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 VTI1BQ9UEU0 232 aa9.11□□□□□ -0.95
FARP1-226ENST00000599040 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.11□□□□□ -0.95
FARP1-226ENST00000599040 DNMT3AQ9Y6K1 912 aaPredicted RBP9.11□□□□□ -0.95
FARP1-226ENST00000599040 KIR2DS5A0A0G2JLQ3 304 aa9.1□□□□□ -0.95
FARP1-226ENST00000599040 A0A0G2JNG1 304 aa9.1□□□□□ -0.95
FARP1-226ENST00000599040 IGHV5-10-1A0A0J9YXX1 117 aa9.1□□□□□ -0.95
FARP1-226ENST00000599040 C17orf113A0A1B0GUU1 675 aa9.1□□□□□ -0.95
FARP1-226ENST00000599040 NPEPPSL1A6NEC2 478 aa9.1□□□□□ -0.95
FARP1-226ENST00000599040 A8MT66 165 aa9.1□□□□□ -0.95
FARP1-226ENST00000599040 IQCF5A8MTL0 148 aa9.1□□□□□ -0.95
FARP1-226ENST00000599040 FADS2P1A8MWK0 482 aa9.1□□□□□ -0.95
FARP1-226ENST00000599040 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.1□□□□□ -0.95
FARP1-226ENST00000599040 STX16-NPEPL1H3BU86 382 aa9.1□□□□□ -0.95
FARP1-226ENST00000599040 KIR2DS3K7RE56 304 aa9.1□□□□□ -0.95
FARP1-226ENST00000599040 STX16O14662 325 aa9.1□□□□□ -0.95
FARP1-226ENST00000599040 NUAK1O60285 661 aa9.1□□□□□ -0.95
FARP1-226ENST00000599040 DLX3O60479 287 aa9.1□□□□□ -0.95
FARP1-226ENST00000599040 KCNJ13O60928 360 aa9.1□□□□□ -0.95
FARP1-226ENST00000599040 SNNO75324 88 aaPredicted RBP9.1□□□□□ -0.95
FARP1-226ENST00000599040 CRCPO75575 148 aa9.1□□□□□ -0.95
FARP1-226ENST00000599040 C1QL1O75973 258 aa9.1□□□□□ -0.95
FARP1-226ENST00000599040 WISP3O95389 354 aaPredicted RBP9.1□□□□□ -0.95
FARP1-226ENST00000599040 MLYCDO95822 493 aa9.1□□□□□ -0.95
FARP1-226ENST00000599040 CATP04040 527 aaKnown RBP9.1□□□□□ -0.95
FARP1-226ENST00000599040 RPN2P04844 631 aa9.1□□□□□ -0.95
FARP1-226ENST00000599040 ANXA5P08758 320 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms