RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 SLC41A2Q96JW4 573 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 FCRL4Q96PJ5 515 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 ZSCAN5AQ9BUG6 496 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 RIOK2Q9BVS4 552 aaKnown RBP13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 ZNF552Q9H707 407 aaPredicted RBP13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 UCK1Q9HA47 277 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 ARFGAP3Q9NP61 516 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 SMOXQ9NWM0 555 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 MARCH4Q9P2E8 410 aaPredicted RBP13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 ZNF624Q9P2J8 865 aaPredicted RBP13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 SH3BGRL2Q9UJC5 107 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 FADS2P1A8MWK0 482 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 CXorf49A8MYA2 514 aaPredicted RBP13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 CD3EAPO15446 510 aaKnown RBP13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 UGT1A9O60656 530 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 PRAMEF1O95521 474 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 RAB40ALP0C0E4 278 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 CD99P14209 185 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 UGT1A6P19224 532 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 OGNP20774 298 aaKnown RBP13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 UGT1A1P22309 533 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 UGT1A4P22310 534 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 SLC19A1P41440 591 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 CDKN1CP49918 316 aaPredicted RBP13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 ART1P52961 327 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 CDC16Q13042 620 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 ITGA9Q13797 1035 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 GPR18Q14330 331 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 TYSND1Q2T9J0 566 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 KBTBD12Q3ZCT8 623 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 ATP13A5Q4VNC0 1218 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 HSP90AA5PQ58FG0 334 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 ALS2CLQ60I27 953 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 FAM198BQ6UWH4 519 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 GALNT7Q86SF2 657 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 PIANPQ8IYJ0 282 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 CALML6Q8TD86 181 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 CLIP3Q96DZ5 547 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 CNDP1Q96KN2 507 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 VPS35Q96QK1 796 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 CYTH2Q99418 400 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 WDR77Q9BQA1 342 aaPredicted RBP13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 FAM167BQ9BTA0 163 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 MCMBPQ9BTE3 642 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 NLNQ9BYT8 704 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 ASB8Q9H765 288 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 UGT1A7Q9HAW7 530 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 UGT1A10Q9HAW8 530 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 UGT1A8Q9HAW9 530 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 IARS2Q9NSE4 1012 aaKnown RBP13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 KLC4Q9NSK0 619 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 CATSPERZQ9NTU4 200 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 VPS18Q9P253 973 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 FETUBQ9UGM5 382 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 CNOT6Q9ULM6 557 aaKnown RBP13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 NFS1Q9Y697 457 aa13.43□□□□□ -0.26
SHKBP1-218ENST00000598907 TRGV8A0A0C4DH27 118 aa13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 GOLGA8KD6RF30 607 aa13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 GOLGA8TH3BQL2 631 aa13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 MEN1O00255 615 aa13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 IPO13O94829 963 aaKnown RBP13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 SHBGP04278 402 aa13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 PYGLP06737 847 aa13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 PRSS56P0CW18 603 aa13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 XRCC1P18887 633 aaPredicted RBP13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 ITGALP20701 1170 aa13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 CAPN3P20807 821 aa13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 GCAP28676 217 aa13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 TLE4Q04727 773 aa13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 NAB1Q13506 487 aa13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 THOC5Q13769 683 aaKnown RBP13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 PTCHD3Q3KNS1 767 aa13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 FASTKD1Q53R41 847 aaKnown RBP13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 CRTC3Q6UUV7 619 aa13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 KIAA0408Q6ZU52 694 aa13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 SLC26A11Q86WA9 606 aa13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 CILP2Q8IUL8 1156 aa13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 ZNF808Q8N4W9 903 aaPredicted RBP13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 C2CD4AQ8NCU7 369 aaPredicted RBP13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 UHMK1Q8TAS1 419 aaKnown RBP13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 TCF12Q99081 682 aa13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 MAP3K3Q99759 626 aa13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 DHRS4Q9BTZ2 278 aa13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 SPATA16Q9BXB7 569 aa13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 FAM96AQ9H5X1 160 aa13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 DNAJC16Q9Y2G8 782 aa13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 FER1L5A0AVI2 2057 aa13.42□□□□□ -0.26
SHKBP1-218ENST00000598907 IGLV3-16A0A075B6K0 115 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 OR52A4PA6NMU1 304 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 C19orf84I3L1E1 186 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 DYNC1I1O14576 645 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 GPR39O43194 453 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 GRID2O43424 1007 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 JRKO75564 520 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 PIAS1O75925 651 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 S1PR4O95977 384 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 GABRB3P28472 473 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 SLC1A2P43004 574 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 CTBP1Q13363 440 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 EFTUD2Q15029 972 aaKnown RBP eCLIP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms