RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 A6NL46 340 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 ARHGEF33A8MVX0 844 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 MAP2K7O14733 419 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 KPNA5O15131 536 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 PRICKLE3O43900 615 aaPredicted RBP13.21□□□□□ -0.29
SCAF1-203ENST00000598359 BANF1O75531 89 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 KLF7O75840 302 aaPredicted RBP13.21□□□□□ -0.29
SCAF1-203ENST00000598359 SEC31AO94979 1220 aaKnown RBP13.21□□□□□ -0.29
SCAF1-203ENST00000598359 ESR1P03372 595 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 HBQ1P09105 142 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 MLNP12872 115 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 PKMP14618 531 aaKnown RBP13.21□□□□□ -0.29
SCAF1-203ENST00000598359 PAMP19021 973 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 OGNP20774 298 aaKnown RBP13.21□□□□□ -0.29
SCAF1-203ENST00000598359 AGXTP21549 392 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 OTX2P32243 289 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 CASRP41180 1078 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 CUL1Q13616 776 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 ATP1A4Q13733 1029 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 THOC5Q13769 683 aaKnown RBP13.21□□□□□ -0.29
SCAF1-203ENST00000598359 GBX1Q14549 363 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.21□□□□□ -0.29
SCAF1-203ENST00000598359 RHBDD2Q6NTF9 364 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 TCTN3Q6NUS6 607 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 ZNF549Q6P9A3 640 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 DTWD1Q8N5C7 304 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 GIMAP7Q8NHV1 300 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 SEC14L1Q92503 715 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 RAD51AP1Q96B01 352 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 SIGLEC10Q96LC7 697 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 FOPNLQ96NB1 174 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 ACAT2Q9BWD1 397 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 DDX47Q9H0S4 455 aaKnown RBP13.21□□□□□ -0.29
SCAF1-203ENST00000598359 ACSS2Q9NR19 701 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 C20orf96Q9NUD7 363 aaPredicted RBP13.21□□□□□ -0.29
SCAF1-203ENST00000598359 TXLNGQ9NUQ3 528 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 ANKMY1Q9P2S6 941 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 ANAPC2Q9UJX6 822 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 AP1M2Q9Y6Q5 423 aa13.21□□□□□ -0.29
SCAF1-203ENST00000598359 TNRC6AQ8NDV7 1962 aaKnown RBP13.21□□□□□ -0.29
SCAF1-203ENST00000598359 RELNP78509 3460 aa13.21□□□□□ -0.3
SCAF1-203ENST00000598359 FER1L5A0AVI2 2057 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 A0A1W2PPV9 198 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 E5RI56 91 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 MASP2O00187 686 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 PFDN6O15212 129 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 CTSVO60911 334 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 USP1O94782 785 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 MATN4O95460 622 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 ITGAXP20702 1163 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 ALAS2P22557 587 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 SLC1A2P43004 574 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 MAGEA3P43357 314 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 FNTAP49354 379 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 CLCN7P51798 805 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 DCDP81605 110 aaKnown RBP13.2□□□□□ -0.3
SCAF1-203ENST00000598359 MPP1Q00013 466 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 KLRB1Q12918 225 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 TSTA3Q13630 321 aaPredicted RBP13.2□□□□□ -0.3
SCAF1-203ENST00000598359 RAPSNQ13702 412 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 PPP1R7Q15435 360 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 KLHL38Q2WGJ6 581 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 NKAIN1Q4KMZ8 207 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 RNASEH2BQ5TBB1 312 aaKnown RBP13.2□□□□□ -0.3
SCAF1-203ENST00000598359 C8orf74Q6P047 294 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 TTLL10Q6ZVT0 673 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 METTL27Q8N6F8 245 aaPredicted RBP13.2□□□□□ -0.3
SCAF1-203ENST00000598359 TEX19Q8NA77 164 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.2□□□□□ -0.3
SCAF1-203ENST00000598359 SLC22A18Q96BI1 424 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 DPH2Q9BQC3 489 aaPredicted RBP13.2□□□□□ -0.3
SCAF1-203ENST00000598359 LRRC1Q9BTT6 524 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 NDC1Q9BTX1 674 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 SLC25A23Q9BV35 468 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 SLC22A11Q9NSA0 550 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 INTS10Q9NVR2 710 aaKnown RBP13.2□□□□□ -0.3
SCAF1-203ENST00000598359 STOX2Q9P2F5 926 aaPredicted RBP13.2□□□□□ -0.3
SCAF1-203ENST00000598359 IFT80Q9P2H3 777 aaPredicted RBP13.2□□□□□ -0.3
SCAF1-203ENST00000598359 NDOR1Q9UHB4 597 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 ASIC3Q9UHC3 531 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 GPN3Q9UHW5 284 aaPredicted RBP13.2□□□□□ -0.3
SCAF1-203ENST00000598359 MED16Q9Y2X0 877 aa13.2□□□□□ -0.3
SCAF1-203ENST00000598359 PTRH2Q9Y3E5 179 aaKnown RBP13.2□□□□□ -0.3
SCAF1-203ENST00000598359 UTP20O75691 2785 aaKnown RBP13.2□□□□□ -0.3
SCAF1-203ENST00000598359 GOLGA6L10A0A0M3HER8 536 aa13.19□□□□□ -0.3
SCAF1-203ENST00000598359 MAGEB16A2A368 324 aa13.19□□□□□ -0.3
SCAF1-203ENST00000598359 H3BMM5 538 aa13.19□□□□□ -0.3
SCAF1-203ENST00000598359 SASH3O75995 380 aa13.19□□□□□ -0.3
SCAF1-203ENST00000598359 CCNFP41002 786 aa13.19□□□□□ -0.3
SCAF1-203ENST00000598359 MLLT10P55197 1068 aa13.19□□□□□ -0.3
SCAF1-203ENST00000598359 ADARP55265 1226 aaKnown RBP13.19□□□□□ -0.3
SCAF1-203ENST00000598359 VSX2P58304 361 aaPredicted RBP13.19□□□□□ -0.3
SCAF1-203ENST00000598359 LONRF1Q17RB8 773 aa13.19□□□□□ -0.3
SCAF1-203ENST00000598359 MSS51Q4VC12 460 aa13.19□□□□□ -0.3
SCAF1-203ENST00000598359 HSP90AA5PQ58FG0 334 aa13.19□□□□□ -0.3
SCAF1-203ENST00000598359 FRMPD2BQ6IN97 320 aa13.19□□□□□ -0.3
SCAF1-203ENST00000598359 TLDC1Q6P9B6 456 aa13.19□□□□□ -0.3
SCAF1-203ENST00000598359 SUSD1Q6UWL2 747 aa13.19□□□□□ -0.3
SCAF1-203ENST00000598359 PPIL6Q8IXY8 311 aa13.19□□□□□ -0.3
SCAF1-203ENST00000598359 EIF1ADQ8N9N8 165 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms