RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 SPRTNQ9H040 489 aaPredicted RBP16.09■□□□□ 0.17
SSBP4-204ENST00000597724 RHOJQ9H4E5 214 aa16.09■□□□□ 0.17
SSBP4-204ENST00000597724 LRRC4CQ9HCJ2 640 aa16.09■□□□□ 0.17
SSBP4-204ENST00000597724 CROTQ9UKG9 612 aa16.09■□□□□ 0.17
SSBP4-204ENST00000597724 ADAMTS6Q9UKP5 1117 aa16.09■□□□□ 0.17
SSBP4-204ENST00000597724 PLCL2Q9UPR0 1127 aa16.09■□□□□ 0.17
SSBP4-204ENST00000597724 KLK4Q9Y5K2 254 aa16.09■□□□□ 0.17
SSBP4-204ENST00000597724 PIEZO2Q9H5I5 2752 aa16.08■□□□□ 0.16
SSBP4-204ENST00000597724 FAM95CA0A1B0GW59 222 aa16.08■□□□□ 0.16
SSBP4-204ENST00000597724 FAM159BA6NKW6 160 aa16.08■□□□□ 0.16
SSBP4-204ENST00000597724 ZNF839A8K0R7 811 aa16.08■□□□□ 0.16
SSBP4-204ENST00000597724 CXorf49A8MYA2 514 aaPredicted RBP16.08■□□□□ 0.16
SSBP4-204ENST00000597724 TARM1B6A8C7 271 aa16.08■□□□□ 0.16
SSBP4-204ENST00000597724 E7ENX8 843 aa16.08■□□□□ 0.16
SSBP4-204ENST00000597724 E7EQ34 232 aa16.08■□□□□ 0.16
SSBP4-204ENST00000597724 SLC16A5O15375 505 aa16.08■□□□□ 0.16
SSBP4-204ENST00000597724 ZNF749O43361 778 aa16.08■□□□□ 0.16
SSBP4-204ENST00000597724 OR2B3O76000 313 aa16.08■□□□□ 0.16
SSBP4-204ENST00000597724 C8GP07360 202 aa16.08■□□□□ 0.16
SSBP4-204ENST00000597724 CTSBP07858 339 aa16.08■□□□□ 0.16
SSBP4-204ENST00000597724 DLSTP36957 453 aa16.08■□□□□ 0.16
SSBP4-204ENST00000597724 TAP2Q03519 686 aa16.08■□□□□ 0.16
SSBP4-204ENST00000597724 ILF2Q12905 390 aaKnown RBP16.08■□□□□ 0.16
SSBP4-204ENST00000597724 GPS2Q13227 327 aa16.08■□□□□ 0.16
SSBP4-204ENST00000597724 SP140Q13342 867 aa16.08■□□□□ 0.16
SSBP4-204ENST00000597724 ZNF517Q6ZMY9 492 aaPredicted RBP16.08■□□□□ 0.16
SSBP4-204ENST00000597724 LRRC56Q8IYG6 542 aaPredicted RBP16.08■□□□□ 0.16
SSBP4-204ENST00000597724 MCOLN3Q8TDD5 553 aa16.08■□□□□ 0.16
SSBP4-204ENST00000597724 PDLIM5Q96HC4 596 aaKnown RBP16.08■□□□□ 0.16
SSBP4-204ENST00000597724 LRFN5Q96NI6 719 aa16.08■□□□□ 0.16
SSBP4-204ENST00000597724 UBL7Q96S82 380 aaPredicted RBP16.08■□□□□ 0.16
SSBP4-204ENST00000597724 MIPEPQ99797 713 aa16.08■□□□□ 0.16
SSBP4-204ENST00000597724 ACAT2Q9BWD1 397 aa16.08■□□□□ 0.16
SSBP4-204ENST00000597724 ACTR5Q9H9F9 607 aaPredicted RBP16.08■□□□□ 0.16
SSBP4-204ENST00000597724 PARVBQ9HBI1 364 aa16.08■□□□□ 0.16
SSBP4-204ENST00000597724 EURLQ9NYK6 297 aa16.08■□□□□ 0.16
SSBP4-204ENST00000597724 PDE10AQ9Y233 779 aa16.08■□□□□ 0.16
SSBP4-204ENST00000597724 SEC16AO15027 2179 aa16.08■□□□□ 0.16
SSBP4-204ENST00000597724 CACNA1GO43497 2377 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 ERVH48-1M5A8F1 160 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 MEN1O00255 615 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 HBQ1P09105 142 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 TCN2P20062 427 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 SAT1P21673 171 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 IMPA1P29218 277 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 RPA3P35244 121 aaPredicted RBP16.07■□□□□ 0.16
SSBP4-204ENST00000597724 RORAP35398 523 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 TAS2R39P59534 338 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 YBX1P67809 324 aaKnown RBP16.07■□□□□ 0.16
SSBP4-204ENST00000597724 CYP4F2P78329 520 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 PCSK4Q6UW60 755 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 TMEM207Q6UWW9 146 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 MCATQ8IVS2 390 aaKnown RBP16.07■□□□□ 0.16
SSBP4-204ENST00000597724 SYTL1Q8IYJ3 562 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 DSELQ8IZU8 1212 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 CEP112Q8N8E3 955 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 PPFIBP2Q8ND30 876 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 CT55Q8WUE5 264 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 TTC9Q92623 222 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 CLIP3Q96DZ5 547 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 VPS39Q96JC1 886 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 CCDC138Q96M89 665 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 BBC3Q96PG8 261 aaPredicted RBP16.07■□□□□ 0.16
SSBP4-204ENST00000597724 CPNE1Q99829 537 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 FAM129AQ9BZQ8 928 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 PCMTD2Q9NV79 361 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 KCND3Q9UK17 655 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 MTO1Q9Y2Z2 717 aaKnown RBP16.07■□□□□ 0.16
SSBP4-204ENST00000597724 PCDHGA6Q9Y5G7 932 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 AP1M2Q9Y6Q5 423 aa16.07■□□□□ 0.16
SSBP4-204ENST00000597724 ZNF891A8MT65 544 aaPredicted RBP16.06■□□□□ 0.16
SSBP4-204ENST00000597724 C21orf140B9A014 251 aa16.06■□□□□ 0.16
SSBP4-204ENST00000597724 NKX2-8O15522 239 aa16.06■□□□□ 0.16
SSBP4-204ENST00000597724 CTSVO60911 334 aa16.06■□□□□ 0.16
SSBP4-204ENST00000597724 ITGB2P05107 769 aa16.06■□□□□ 0.16
SSBP4-204ENST00000597724 KLK3P07288 261 aaPredicted RBP16.06■□□□□ 0.16
SSBP4-204ENST00000597724 ZNF37AP17032 561 aaPredicted RBP16.06■□□□□ 0.16
SSBP4-204ENST00000597724 CMPK1P30085 196 aa16.06■□□□□ 0.16
SSBP4-204ENST00000597724 PRDX1Q06830 199 aaKnown RBP16.06■□□□□ 0.16
SSBP4-204ENST00000597724 DNASE1L3Q13609 305 aa16.06■□□□□ 0.16
SSBP4-204ENST00000597724 PHKG1Q16816 387 aa16.06■□□□□ 0.16
SSBP4-204ENST00000597724 SOWAHCQ53LP3 525 aaPredicted RBP16.06■□□□□ 0.16
SSBP4-204ENST00000597724 ZC3H12BQ5HYM0 836 aaKnown RBP16.06■□□□□ 0.16
SSBP4-204ENST00000597724 TLDC1Q6P9B6 456 aa16.06■□□□□ 0.16
SSBP4-204ENST00000597724 CEP97Q8IW35 865 aa16.06■□□□□ 0.16
SSBP4-204ENST00000597724 STARD8Q92502 1023 aa16.06■□□□□ 0.16
SSBP4-204ENST00000597724 MR1Q95460 341 aa16.06■□□□□ 0.16
SSBP4-204ENST00000597724 DPH7Q9BTV6 452 aa16.06■□□□□ 0.16
SSBP4-204ENST00000597724 STOX2Q9P2F5 926 aaPredicted RBP16.06■□□□□ 0.16
SSBP4-204ENST00000597724 TXNDC16Q9P2K2 825 aa16.06■□□□□ 0.16
SSBP4-204ENST00000597724 MRPS18BQ9Y676 258 aaKnown RBP16.06■□□□□ 0.16
SSBP4-204ENST00000597724 OR2A25A4D2G3 310 aa16.05■□□□□ 0.16
SSBP4-204ENST00000597724 ZSCAN9O15535 394 aaPredicted RBP16.05■□□□□ 0.16
SSBP4-204ENST00000597724 GP5P40197 560 aa16.05■□□□□ 0.16
SSBP4-204ENST00000597724 TSTA3Q13630 321 aaPredicted RBP16.05■□□□□ 0.16
SSBP4-204ENST00000597724 ZNF460Q14592 562 aa16.05■□□□□ 0.16
SSBP4-204ENST00000597724 NAA25Q14CX7 972 aa16.05■□□□□ 0.16
SSBP4-204ENST00000597724 KBTBD12Q3ZCT8 623 aa16.05■□□□□ 0.16
SSBP4-204ENST00000597724 CRTC2Q53ET0 693 aaPredicted RBP16.05■□□□□ 0.16
SSBP4-204ENST00000597724 ICE2Q659A1 982 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms