RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 F3P13726 295 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 GFAPP14136 432 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 CPA3P15088 417 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 CHN1P15882 459 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 ACADLP28330 430 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 RXRGP48443 463 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 AP1S2P56377 157 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 ASPHQ12797 758 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 TGFBIQ15582 683 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 CAPRIN2Q6IMN6 1127 aaKnown RBP11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 SBSNQ6UWP8 590 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 ZYG11AQ6WRX3 759 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 CYHR1Q6ZMK1 362 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 NRROSQ86YC3 692 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 DCUN1D3Q8IWE4 304 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 TRIM48Q8IWZ4 208 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 RAB42Q8N4Z0 105 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 AVL9Q8NBF6 648 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 FAM46DQ8NEK8 389 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 SPDYE1Q8NFV5 336 aaPredicted RBP11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 CCDC126Q96EE4 140 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 DEPDC7Q96QD5 511 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 ATOH8Q96SQ7 321 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 ARHGAP9Q9BRR9 750 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 HGH1Q9BTY7 390 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 SLC12A9Q9BXP2 914 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 STN1Q9H668 368 aaKnown RBP11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 MVB12BQ9H7P6 319 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 MLXIPLQ9NP71 852 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 INTS9Q9NV88 658 aaKnown RBP11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 ARL15Q9NXU5 204 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 UTP6Q9NYH9 597 aaKnown RBP11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 IKZF3Q9UKT9 509 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 WDR37Q9Y2I8 494 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 ST14Q9Y5Y6 855 aa11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 CFAP20Q9Y6A4 193 aaKnown RBP11.7□□□□□ -0.54
SHKBP1-213ENST00000597325 KIR2DS5A0A0G2JLQ3 304 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 A0A0G2JNG1 304 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 NEMP2A6NFY4 417 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 NCF1BA6NI72 391 aaPredicted RBP11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 OR52A4PA6NMU1 304 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 NCF1CA8MVU1 366 aaPredicted RBP11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 ARHGEF33A8MVX0 844 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 LMO7DNF2Z398 122 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 GFYI3L273 518 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 KIR2DS3K7RE56 304 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 UBXN8O00124 270 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 FFAR2O15552 330 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 CSO75390 466 aaKnown RBP11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 C1orf105O95561 183 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 GUCA1CO95843 209 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 ANXA5P08758 320 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 NCF1P14598 390 aaPredicted RBP11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 ATP5F1P24539 256 aaPredicted RBP11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 ELAVL4P26378 380 aaKnown RBP11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 NDUFS1P28331 727 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 SERPINB4P48594 390 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 RPIAP49247 311 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 BIRC2Q13490 618 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 MPP2Q14168 576 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 KIR2DS5Q14953 304 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 RPE65Q16518 533 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 PHKG1Q16816 387 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 PPP1R3AQ16821 1122 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 ABRAXAS1Q6UWZ7 409 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 SLC22A9Q8IVM8 553 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 TBC1D21Q8IYX1 336 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 TCAIMQ8N3R3 496 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 FBXO39Q8N4B4 442 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 FBXO15Q8NCQ5 510 aaPredicted RBP11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 OR5K2Q8NHB8 316 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 PPP1R14CQ8TAE6 165 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 DENND1AQ8TEH3 1009 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 ZDHHC1Q8WTX9 485 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 RAD51AP1Q96B01 352 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 FERD3LQ96RJ6 166 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 INSM2Q96T92 566 aaPredicted RBP11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 RDH14Q9HBH5 336 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 FAM53CQ9NYF3 392 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 COPG2Q9UBF2 871 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 POLG2Q9UHN1 485 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 ATXN7L1Q9ULK2 861 aaPredicted RBP11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 SATB2Q9UPW6 733 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 PDE10AQ9Y233 779 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 TDRKHQ9Y2W6 561 aaKnown RBP11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 CSNK1G3Q9Y6M4 447 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 COLEC10Q9Y6Z7 277 aa11.69□□□□□ -0.54
SHKBP1-213ENST00000597325 A6NCN8 305 aa11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 BIRC5O15392 142 aa11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 H2AFYO75367 372 aaKnown RBP11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 ALPPL2P10696 532 aa11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 ETV4P43268 484 aa11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 ALDH18A1P54886 795 aaKnown RBP11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 CDKL1Q00532 357 aa11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 CLCA4Q14CN2 919 aa11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 PCLAFQ15004 111 aa11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 PFKFB4Q16877 469 aa11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 DEFB133Q30KQ1 61 aa11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 CDKL4Q5MAI5 379 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms