RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 DYRK1BQ9Y463 629 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 TRAF6Q9Y4K3 522 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 KCNE2Q9Y6J6 123 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 PCM1Q15154 2024 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 SLCO1B7G3V0H7 640 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 AZIN1O14977 448 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 SNX3O60493 162 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 OR4F21O95013 312 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 EBLN1P0CF75 366 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 ERVPABLB-1P60509 514 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 BIRC2Q13490 618 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 CCDC6Q16204 474 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 C14orf28Q4W4Y0 310 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.17□□□□□ -0.14
VRK3-212ENST00000596814 CLEC6AQ6EIG7 209 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 LETMD1Q6P1Q0 360 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 OGFOD3Q6PK18 319 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 TMEM26Q6ZUK4 368 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 MILR1Q7Z6M3 343 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 C17orf82Q86X59 251 aaPredicted RBP14.17□□□□□ -0.14
VRK3-212ENST00000596814 ARL14Q8N4G2 192 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 KYQ8NBH2 561 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 GPR156Q8NFN8 814 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 OR4E2Q8NGC2 313 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 SETD7Q8WTS6 366 aaKnown RBP14.17□□□□□ -0.14
VRK3-212ENST00000596814 FAR2Q96K12 515 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 PRRX2Q99811 253 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 SIKE1Q9BRV8 207 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 HAUS8Q9BT25 410 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 SMOC1Q9H4F8 434 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 ACTR8Q9H981 624 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 IL21RQ9HBE5 538 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 TAC3Q9UHF0 121 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 DCTN4Q9UJW0 460 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 GMEB2Q9UKD1 530 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 USH1CQ9Y6N9 552 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 WDFY4Q6ZS81 3184 aa14.17□□□□□ -0.14
VRK3-212ENST00000596814 A0A1W2PPV9 198 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 FAM221BA6H8Z2 402 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 E7EQ34 232 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 MATN2O00339 956 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 CLGNO14967 610 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 CLDN9O95484 217 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 ENO1P06733 434 aaKnown RBP14.16□□□□□ -0.14
VRK3-212ENST00000596814 FGF4P08620 206 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 GIMD1P0DJR0 217 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 NPPBP16860 134 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 GNAZP19086 355 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 FOXA1P55317 472 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 IRF8Q02556 426 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 GKAP1Q5VSY0 366 aaPredicted RBP14.16□□□□□ -0.14
VRK3-212ENST00000596814 KANK2Q63ZY3 851 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 KANSL1Q7Z3B3 1105 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 TMPRSS11BQ86T26 416 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 GATAD2AQ86YP4 633 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 MYLK4Q86YV6 388 aaPredicted RBP14.16□□□□□ -0.14
VRK3-212ENST00000596814 CLYBLQ8N0X4 340 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 ARL10Q8N8L6 244 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 CDYL2Q8N8U2 506 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 RFWD2Q8NHY2 731 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 SAP25Q8TEE9 199 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 SLC5A11Q8WWX8 675 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 NEIL2Q969S2 332 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 KCNA7Q96RP8 456 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 ACAT2Q9BWD1 397 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 NLGN3Q9NZ94 848 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 VTI1BQ9UEU0 232 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 TRPS1Q9UHF7 1281 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 DNAH14Q0VDD8 3507 aa14.16□□□□□ -0.14
VRK3-212ENST00000596814 KHNYNO15037 678 aaKnown RBP14.15□□□□□ -0.14
VRK3-212ENST00000596814 HDAC3O15379 428 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 UGDHO60701 494 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 CHRM5P08912 532 aaPredicted RBP14.15□□□□□ -0.14
VRK3-212ENST00000596814 ALPPL2P10696 532 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 UROSP10746 265 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 HGFP14210 728 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 ALOX15P16050 662 aaPredicted RBP14.15□□□□□ -0.14
VRK3-212ENST00000596814 PSMB5P28074 263 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 AQP5P55064 265 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 CHIT1Q13231 466 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 TERF2Q15554 542 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 PDCD2Q16342 344 aaPredicted RBP14.15□□□□□ -0.14
VRK3-212ENST00000596814 GGTA1PQ4G0N0 100 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 XKR6Q5GH73 641 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 PIGWQ7Z7B1 504 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 C17orf64Q86WR6 236 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 ZNF761Q86XN6 746 aaPredicted RBP14.15□□□□□ -0.14
VRK3-212ENST00000596814 PRSS33Q8NF86 280 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 MAGEB10Q96LZ2 347 aaPredicted RBP14.15□□□□□ -0.14
VRK3-212ENST00000596814 DUSP23Q9BVJ7 150 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 GTPBP2Q9BX10 602 aaKnown RBP14.15□□□□□ -0.14
VRK3-212ENST00000596814 UCK1Q9HA47 277 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 SH2B3Q9UQQ2 575 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 RNF11Q9Y3C5 154 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 PCDHB11Q9Y5F2 797 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 RALGAPA1Q6GYQ0 2036 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 A0A0G2JND7 137 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 SKAP2O75563 359 aaPredicted RBP14.15□□□□□ -0.14
VRK3-212ENST00000596814 CHEK2O96017 543 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 CAPN1P07384 714 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms