RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 SLMAPQ14BN4 828 aa16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 ZIC1Q15915 447 aa16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 KIAA1614Q5VZ46 1190 aa16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 DNAJC22Q8N4W6 341 aa16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 OR2L3Q8NG85 312 aa16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 OR2A1Q8NGT9 310 aa16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 OR1L3Q8NH93 324 aa16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 ATL1Q8WXF7 558 aa16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 GPR22Q99680 433 aa16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 PCBD2Q9H0N5 130 aa16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 FAM60AQ9NP50 221 aa16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 MRPS30Q9NP92 439 aaKnown RBP16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 IRAK4Q9NWZ3 460 aa16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 ANKMY1Q9P2S6 941 aa16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 ADAMTS6Q9UKP5 1117 aa16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 NOVA2Q9UNW9 492 aaKnown RBP16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 PDE10AQ9Y233 779 aa16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 MTO1Q9Y2Z2 717 aaKnown RBP16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 KLK4Q9Y5K2 254 aa16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 A0A1W2PPV9 198 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 KRT87PA6NCN2 255 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 K7ENP7 123 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 PIAS1O75925 651 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 OR2B3O76000 313 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 TIAF1O95411 115 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 NTRK1P04629 796 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 CCND1P24385 295 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 STAT5AP42229 794 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 GRIA3P42263 894 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 THEMIS2Q5TEJ8 643 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 ARHGAP40Q5TG30 622 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 TLDC1Q6P9B6 456 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 INO80CQ6PI98 192 aaPredicted RBP16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 SUSD1Q6UWL2 747 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 VASH2Q86V25 355 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 MCATQ8IVS2 390 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 FAM20CQ8IXL6 584 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 SNRNP27Q8WVK2 155 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 DLG3Q92796 817 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 CLIP3Q96DZ5 547 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 LRFN5Q96NI6 719 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 FAM117AQ9C073 453 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 ACTR5Q9H9F9 607 aaPredicted RBP16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 L2HGDHQ9H9P8 463 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 CPNE5Q9HCH3 593 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 EURLQ9NYK6 297 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 NINJ2Q9NZG7 142 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 KCND3Q9UK17 655 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 SNX7Q9UNH6 387 aa16.62■□□□□ 0.25
SHKBP1-212ENST00000596163 TEX51A0A1B0GUA7 166 aa16.61■□□□□ 0.25
SHKBP1-212ENST00000596163 EFSO43281 561 aa16.61■□□□□ 0.25
SHKBP1-212ENST00000596163 SRPX2O60687 465 aaPredicted RBP16.61■□□□□ 0.25
SHKBP1-212ENST00000596163 C1QAP02745 245 aa16.61■□□□□ 0.25
SHKBP1-212ENST00000596163 RHOXF2BP0C7M4 288 aa16.61■□□□□ 0.25
SHKBP1-212ENST00000596163 HRH2P25021 359 aa16.61■□□□□ 0.25
SHKBP1-212ENST00000596163 IMPA1P29218 277 aa16.61■□□□□ 0.25
SHKBP1-212ENST00000596163 GABRA4P48169 554 aa16.61■□□□□ 0.25
SHKBP1-212ENST00000596163 MC1RQ01726 317 aa16.61■□□□□ 0.25
SHKBP1-212ENST00000596163 PRDX1Q06830 199 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-212ENST00000596163 TCTE1Q5JU00 501 aa16.61■□□□□ 0.25
SHKBP1-212ENST00000596163 ICE2Q659A1 982 aa16.61■□□□□ 0.25
SHKBP1-212ENST00000596163 FCRL6Q6DN72 434 aa16.61■□□□□ 0.25
SHKBP1-212ENST00000596163 AGTRAPQ6RW13 159 aa16.61■□□□□ 0.25
SHKBP1-212ENST00000596163 RHOXF2Q9BQY4 288 aa16.61■□□□□ 0.25
SHKBP1-212ENST00000596163 ACAT2Q9BWD1 397 aa16.61■□□□□ 0.25
SHKBP1-212ENST00000596163 LHX9Q9NQ69 397 aa16.61■□□□□ 0.25
SHKBP1-212ENST00000596163 CCDC177Q9NQR7 707 aaPredicted RBP16.61■□□□□ 0.25
SHKBP1-212ENST00000596163 ARL15Q9NXU5 204 aa16.61■□□□□ 0.25
SHKBP1-212ENST00000596163 STOX2Q9P2F5 926 aaPredicted RBP16.61■□□□□ 0.25
SHKBP1-212ENST00000596163 CTNNAL1Q9UBT7 734 aa16.61■□□□□ 0.25
SHKBP1-212ENST00000596163 TAC3Q9UHF0 121 aa16.61■□□□□ 0.25
SHKBP1-212ENST00000596163 NFU1Q9UMS0 254 aa16.61■□□□□ 0.25
SHKBP1-212ENST00000596163 KLHL20Q9Y2M5 609 aa16.61■□□□□ 0.25
SHKBP1-212ENST00000596163 AHCTF1Q8WYP5 2266 aa16.61■□□□□ 0.25
SHKBP1-212ENST00000596163 LOC101059948A0A1B0GTJ6 334 aa16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 C21orf140B9A014 251 aa16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 ZNF749O43361 778 aa16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 LIFP15018 202 aa16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 PSMB5P28074 263 aa16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 CRABP2P29373 138 aa16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 DLSTP36957 453 aa16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 RAB10P61026 200 aa16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 TMEM207Q6UWW9 146 aa16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 ADAMTSL2Q86TH1 951 aa16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 SPNS2Q8IVW8 549 aa16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 CEP97Q8IW35 865 aa16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 LRRC56Q8IYG6 542 aaPredicted RBP16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 PPFIBP2Q8ND30 876 aa16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 MR1Q95460 341 aa16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 SLC45A3Q96JT2 553 aa16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 DPH2Q9BQC3 489 aaPredicted RBP16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 DPH7Q9BTV6 452 aa16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 NDC1Q9BTX1 674 aa16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 FUT8Q9BYC5 575 aa16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 DERL2Q9GZP9 239 aa16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 SPRTNQ9H040 489 aaPredicted RBP16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 CDC42EP4Q9H3Q1 356 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 ACSS3Q9H6R3 686 aa16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 ABCF3Q9NUQ8 709 aa16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 SRPK3Q9UPE1 567 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms