RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 ACOX3O15254 700 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 VPS4BO75351 444 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 DNAJB5O75953 348 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 CYP17A1P05093 508 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 CAPN3P20807 821 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 GSTM2P28161 218 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 DGKGP49619 791 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 IFITM3Q01628 133 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 PGS1Q32NB8 556 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 XKR7Q5GH72 579 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 XAF1Q6GPH4 301 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 HSD11B1LQ7Z5J1 315 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 BPIFB6Q8NFQ5 453 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 OTUB2Q96DC9 234 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 RSPRY1Q96DX4 576 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 LRCH3Q96II8 777 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 LHPPQ9H008 270 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 PCDH12Q9NPG4 1184 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 SDR39U1Q9NRG7 319 aaPredicted RBP16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 MARK1Q9P0L2 795 aa16.63■□□□□ 0.25
SHKBP1-205ENST00000594973 DHRS12A0PJE2 317 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 PSMD11O00231 422 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 SLC9A3R1O14745 358 aaPredicted RBP16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 ADH5P11766 374 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 SERPINB1P30740 379 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 ETV3P41162 512 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 HTR6P50406 440 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 MAPK10P53779 464 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 ADARB1P78563 741 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 MESP2Q0VG99 397 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 HABP4Q5JVS0 413 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 IL27RAQ6UWB1 636 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 Q6ZVL8 140 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 EFL1Q7Z2Z2 1120 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 OFCC1Q8IZS5 231 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 CELF5Q8N6W0 485 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 FKBP10Q96AY3 582 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 CLIP3Q96DZ5 547 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 TEX37Q96LM6 180 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 BCL7BQ9BQE9 202 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 FBXO8Q9NRD0 319 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 ANGPTL3Q9Y5C1 460 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 ANGPT2O15123 496 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 BCAS1O75363 584 aaPredicted RBP16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 OR56A5P0C7T3 313 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 CHRNB1P11230 501 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 ATP6V1B2P21281 511 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 BOP1Q14137 746 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 LDLRAP1Q5SW96 308 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 USP43Q70EL4 1123 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 KIAA0907Q7Z7F0 614 aaPredicted RBP16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 DCP2Q8IU60 420 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 LACC1Q8IV20 430 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 DNAJC5GQ8N7S2 189 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 FNDC5Q8NAU1 212 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 PIK3C3Q8NEB9 887 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 CAPSLQ8WWF8 208 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 KCTD5Q9NXV2 234 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 FAM8A1Q9UBU6 413 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 IL36AQ9UHA7 158 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 GPR45Q9Y5Y3 372 aa16.62■□□□□ 0.25
SHKBP1-205ENST00000594973 FAM172BPA6NC97 362 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 CLIC3O95833 236 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 XPAP23025 273 aaPredicted RBP16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 PSMA4P25789 261 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 PIK3CGP48736 1102 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 SLC7A2P52569 658 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 PLA2G16P53816 162 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 AASDHQ4L235 1098 aaPredicted RBP16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 MILR1Q7Z6M3 343 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 GALNT13Q8IUC8 556 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 ARMC8Q8IUR7 673 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 RHBDF1Q96CC6 855 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 SH3GL1Q99961 368 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 FAM83DQ9H4H8 585 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 QPCTLQ9NXS2 382 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 ZNF106Q9H2Y7 1883 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 CEP290O15078 2479 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 A0A1W2PQ67 120 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 UGT2B11O75310 529 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 OTCP00480 354 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 PRR35P0CG20 571 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 TIMP2P16035 220 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 VIPR1P32241 457 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 RPS9P46781 194 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 KRT6CP48668 564 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 GPM6BQ13491 265 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 DNASE1L3Q13609 305 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 CRY1Q16526 586 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 ATP6AP1LQ52LC2 224 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 RBM48Q5RL73 367 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 C6orf136Q5SQH8 315 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 ZNF648Q5T619 568 aaPredicted RBP16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 CRTC3Q6UUV7 619 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 SERPINA13PQ6UXR4 307 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 Q6ZSR9 355 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 SPATA19Q7Z5L4 167 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 DSG4Q86SJ6 1040 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 C11orf74Q86VG3 221 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms