RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 PPARGP37231 505 aaPredicted RBP15.2■□□□□ 0.02
GTF2F1-203ENST00000594213 ZNF169Q14929 603 aaPredicted RBP15.2■□□□□ 0.02
GTF2F1-203ENST00000594213 TUBB8Q3ZCM7 444 aa15.2■□□□□ 0.02
GTF2F1-203ENST00000594213 CCSMST1Q4G0I0 132 aa15.2■□□□□ 0.02
GTF2F1-203ENST00000594213 WASHC2DQ5SRD0 308 aa15.2■□□□□ 0.02
GTF2F1-203ENST00000594213 ATG9BQ674R7 924 aa15.2■□□□□ 0.02
GTF2F1-203ENST00000594213 B3GNTL1Q67FW5 361 aaPredicted RBP15.2■□□□□ 0.02
GTF2F1-203ENST00000594213 FRMPD2BQ6IN97 320 aa15.2■□□□□ 0.02
GTF2F1-203ENST00000594213 PPP1R21Q6ZMI0 780 aa15.2■□□□□ 0.02
GTF2F1-203ENST00000594213 PRUNE1Q86TP1 453 aa15.2■□□□□ 0.02
GTF2F1-203ENST00000594213 TMEM139Q8IV31 216 aa15.2■□□□□ 0.02
GTF2F1-203ENST00000594213 LMF1Q96S06 567 aa15.2■□□□□ 0.02
GTF2F1-203ENST00000594213 TRIM56Q9BRZ2 755 aaKnown RBP15.2■□□□□ 0.02
GTF2F1-203ENST00000594213 TSSK1BQ9BXA7 367 aa15.2■□□□□ 0.02
GTF2F1-203ENST00000594213 SLC39A10Q9ULF5 831 aa15.2■□□□□ 0.02
GTF2F1-203ENST00000594213 NFS1Q9Y697 457 aa15.2■□□□□ 0.02
GTF2F1-203ENST00000594213 DOCK10Q96BY6 2186 aa15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 PCM1Q15154 2024 aa15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 IGLV3-12A0A075B6K2 115 aa15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 LOC105369274A0A096LPK9 316 aa15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 LOC102723532A0A0G2JNH3 316 aa15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 NRP2O60462 931 aa15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 KLHL18O94889 574 aa15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 EDN3P14138 238 aa15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 ETS1P14921 441 aa15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 VSX2P58304 361 aaPredicted RBP15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 PRAMEP78395 509 aa15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 TLR1Q15399 786 aa15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 RBBP7Q16576 425 aa15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 AARS2Q5JTZ9 985 aaKnown RBP15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 C1QL3Q5VWW1 255 aa15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 RPUSD3Q6P087 351 aaKnown RBP15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 FBXO42Q6P3S6 717 aa15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 OR4N4Q8N0Y3 316 aa15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 TTC29Q8NA56 475 aaPredicted RBP15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 OR2L3Q8NG85 312 aa15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 OR2A1Q8NGT9 310 aa15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 RAD51AP1Q96B01 352 aa15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 SLX1AQ9BQ83 275 aa15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 RAB11FIP5Q9BXF6 653 aa15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 FRMD8P1Q9BZ68 369 aaPredicted RBP15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 CHRAC1Q9NRG0 131 aa15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 RAB6BQ9NRW1 208 aa15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 TREX1Q9NSU2 369 aa15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 CATSPERZQ9NTU4 200 aa15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 MAU2Q9Y6X3 613 aa15.19■□□□□ 0.02
GTF2F1-203ENST00000594213 A0A1W2PQ72 361 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 HYKKA2RU49 373 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 OR2A25A4D2G3 310 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 KRT87PA6NCN2 255 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 CD3EAPO15446 510 aaKnown RBP15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 LRRTM2O43300 516 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 HPP00738 406 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 IFNB1P01574 187 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 ZGLP1P0C6A0 271 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 RPS3P23396 243 aaKnown RBP eCLIP15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 PSMB5P28074 263 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 TTPAP49638 278 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 KLC1Q07866 573 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 MFAP5Q13361 173 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 GBX1Q14549 363 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 TMED2Q15363 201 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 PRTGQ2VWP7 1150 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 PCID2Q5JVF3 399 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 ZNF324BQ6AW86 544 aaPredicted RBP15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 ISLR2Q6UXK2 745 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 RNF44Q7L0R7 432 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 KIAA1328Q86T90 577 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 METTL27Q8N6F8 245 aaPredicted RBP15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 CATSPER1Q8NEC5 780 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 STT3BQ8TCJ2 826 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 PSMF1Q92530 271 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 THOC3Q96J01 351 aaKnown RBP15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 C10orf90Q96M02 699 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 MIPEPQ99797 713 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 CRB3Q9BUF7 120 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 EPS8L2Q9H6S3 715 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 ZNF304Q9HCX3 659 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 TTC7AQ9ULT0 858 aaPredicted RBP15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 OSGIN2Q9Y236 505 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 CAPN6Q9Y6Q1 641 aa15.18■□□□□ 0.02
GTF2F1-203ENST00000594213 SVILO95425 2214 aa15.17■□□□□ 0.02
GTF2F1-203ENST00000594213 ENO4A6NNW6 628 aa15.17■□□□□ 0.02
GTF2F1-203ENST00000594213 APRTP07741 180 aa15.17■□□□□ 0.02
GTF2F1-203ENST00000594213 STSP08842 583 aa15.17■□□□□ 0.02
GTF2F1-203ENST00000594213 ARNTP27540 789 aa15.17■□□□□ 0.02
GTF2F1-203ENST00000594213 SOX11P35716 441 aa15.17■□□□□ 0.02
GTF2F1-203ENST00000594213 BDKRB1P46663 353 aa15.17■□□□□ 0.02
GTF2F1-203ENST00000594213 CARSP49589 748 aaKnown RBP15.17■□□□□ 0.02
GTF2F1-203ENST00000594213 YBX1P67809 324 aaKnown RBP15.17■□□□□ 0.02
GTF2F1-203ENST00000594213 KIF5AQ12840 1032 aa15.17■□□□□ 0.02
GTF2F1-203ENST00000594213 CDC16Q13042 620 aa15.17■□□□□ 0.02
GTF2F1-203ENST00000594213 CTSL3PQ5NE16 218 aa15.17■□□□□ 0.02
GTF2F1-203ENST00000594213 IRAK1BP1Q5VVH5 260 aa15.17■□□□□ 0.02
GTF2F1-203ENST00000594213 PTRHD1Q6GMV3 140 aaKnown RBP15.17■□□□□ 0.02
GTF2F1-203ENST00000594213 PRMT9Q6P2P2 845 aa15.17■□□□□ 0.02
GTF2F1-203ENST00000594213 TTC23LQ6PF05 361 aa15.17■□□□□ 0.02
GTF2F1-203ENST00000594213 LAPTM4BQ86VI4 370 aa15.17■□□□□ 0.02
GTF2F1-203ENST00000594213 LRRC6Q86X45 466 aa15.17■□□□□ 0.02
GTF2F1-203ENST00000594213 SLC13A5Q86YT5 568 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms