RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 OLIG2Q13516 323 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 ATP1A4Q13733 1029 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 MYBPC3Q14896 1274 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 CYP1B1Q16678 543 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 CYP2A13Q16696 494 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 MLIPQ5VWP3 458 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 TLDC1Q6P9B6 456 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 SPESP1Q6UW49 350 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 FAM198BQ6UWH4 519 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 RANBP10Q6VN20 620 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 MICALCLQ6ZW33 695 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 BBS12Q6ZW61 710 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 GALNT16Q8N428 558 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 OR52E1Q8NGJ3 308 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 TFGQ92734 400 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-226ENST00000591534 MAGOHBQ96A72 148 aaKnown RBP9.11□□□□□ -0.95
BRCA1-226ENST00000591534 TRAPPC9Q96Q05 1148 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 TTC1Q99614 292 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 CHRNA10Q9GZZ6 450 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 ADAM19Q9H013 955 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 CLEC4MQ9H2X3 399 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-226ENST00000591534 COG4Q9H9E3 785 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 FAM114A2Q9NRY5 505 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 IRAK4Q9NWZ3 460 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 ACTR10Q9NZ32 417 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 FRRS1LQ9P0K9 344 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 IFT80Q9P2H3 777 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-226ENST00000591534 PCYOX1Q9UHG3 505 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 SLC5A6Q9Y289 635 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 COPG1Q9Y678 874 aaKnown RBP9.11□□□□□ -0.95
BRCA1-226ENST00000591534 ZNF106Q9H2Y7 1883 aaKnown RBP9.11□□□□□ -0.95
BRCA1-226ENST00000591534 NOTCH2Q04721 2471 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 USP9XQ93008 2570 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-226ENST00000591534 A1L4Q6 167 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 ANKUB1A6NFN9 424 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 BTN3A3O00478 584 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 BTN3A1O00481 513 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 LIN7AO14910 233 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-226ENST00000591534 WIPF1O43516 503 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 LDB2O43679 373 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 FTH1P02794 183 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 EPXP11678 715 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 ST6GAL1P15907 406 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 RBL1P28749 1068 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 CXCR5P32302 372 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 CA5AP35218 305 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 LMAN1P49257 510 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 PER3P56645 1201 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 XIAPP98170 497 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 DR1Q01658 176 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 OTUD4Q01804 1114 aaKnown RBP9.1□□□□□ -0.95
BRCA1-226ENST00000591534 CALCOCO2Q13137 446 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 MRPL49Q13405 166 aaKnown RBP9.1□□□□□ -0.95
BRCA1-226ENST00000591534 BRD3Q15059 726 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 PTCHD3Q3KNS1 767 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 DCAF10Q5QP82 559 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 PRAMEF17Q5VTA0 474 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 RHBDD2Q6NTF9 364 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 FBXO38Q6PIJ6 1188 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 IGFL3Q6UXB1 125 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 C20orf204Q6ZNR8 217 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 SLCO4C1Q6ZQN7 724 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 TAS2R42Q7RTR8 314 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 GSTA5Q7RTV2 222 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 MTERF4Q7Z6M4 381 aaKnown RBP9.1□□□□□ -0.95
BRCA1-226ENST00000591534 MRGPREQ86SM8 312 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 RBMXL3Q8N7X1 1067 aaKnown RBP9.1□□□□□ -0.95
BRCA1-226ENST00000591534 C19orf47Q8N9M1 422 aaKnown RBP9.1□□□□□ -0.95
BRCA1-226ENST00000591534 Q8NA96 180 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 OR2Y1Q8NGV0 311 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 EDARADDQ8WWZ3 215 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 DLG3Q92796 817 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 PTERQ96BW5 349 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 SNRNP40Q96DI7 357 aaKnown RBP9.1□□□□□ -0.95
BRCA1-226ENST00000591534 TBL1YQ9BQ87 522 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 NDC1Q9BTX1 674 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 OR52A5Q9H2C5 316 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 OR6C2Q9NZP2 312 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 LUZP4Q9P127 313 aa9.1□□□□□ -0.95
BRCA1-226ENST00000591534 PTRH2Q9Y3E5 179 aaKnown RBP9.1□□□□□ -0.95
BRCA1-226ENST00000591534 RP1L1Q8IWN7 2480 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-226ENST00000591534 SPENQ96T58 3664 aaKnown RBP9.09□□□□□ -0.95
BRCA1-226ENST00000591534 TCRBV7S2A1N4TA0A589 114 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 ZSCAN9O15535 394 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-226ENST00000591534 PSMD3O43242 534 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 CBX6O95503 412 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 RPN2P04844 631 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 CAPN1P07384 714 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 ITGAXP20702 1163 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 ACRV1P26436 265 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 MC4RP32245 332 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 ADRA1AP35348 466 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 NSG1P42857 185 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 ARSFP54793 590 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 SOX8P57073 446 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 SARNPP82979 210 aaKnown RBP9.09□□□□□ -0.95
BRCA1-226ENST00000591534 TMPRSS15P98073 1019 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 CACNG1Q06432 222 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 AIMP2Q13155 320 aaKnown RBP9.09□□□□□ -0.95
BRCA1-226ENST00000591534 PRKG2Q13237 762 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms