RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 DRICH1Q6PGQ1 229 aaPredicted RBP17.19■□□□□ 0.34
PRKCSH-211ENST00000590098 CNSTQ6PJW8 725 aa17.19■□□□□ 0.34
PRKCSH-211ENST00000590098 MAGEC3Q8TD91 643 aa17.19■□□□□ 0.34
PRKCSH-211ENST00000590098 MAIP1Q8WWC4 291 aa17.19■□□□□ 0.34
PRKCSH-211ENST00000590098 VPS50Q96JG6 964 aa17.19■□□□□ 0.34
PRKCSH-211ENST00000590098 ASF1BQ9NVP2 202 aa17.19■□□□□ 0.34
PRKCSH-211ENST00000590098 FBXL4Q9UKA2 621 aa17.19■□□□□ 0.34
PRKCSH-211ENST00000590098 NXT1Q9UKK6 140 aaKnown RBP17.19■□□□□ 0.34
PRKCSH-211ENST00000590098 NFS1Q9Y697 457 aa17.19■□□□□ 0.34
PRKCSH-211ENST00000590098 FAM169AQ9Y6X4 670 aa17.19■□□□□ 0.34
PRKCSH-211ENST00000590098 PRICKLE3O43900 615 aaPredicted RBP17.18■□□□□ 0.34
PRKCSH-211ENST00000590098 VAPBO95292 243 aa17.18■□□□□ 0.34
PRKCSH-211ENST00000590098 DDAH2O95865 285 aa17.18■□□□□ 0.34
PRKCSH-211ENST00000590098 MGAT1P26572 445 aa17.18■□□□□ 0.34
PRKCSH-211ENST00000590098 VSX2P58304 361 aaPredicted RBP17.18■□□□□ 0.34
PRKCSH-211ENST00000590098 NR6A1Q15406 480 aa17.18■□□□□ 0.34
PRKCSH-211ENST00000590098 SIX1Q15475 284 aaPredicted RBP17.18■□□□□ 0.34
PRKCSH-211ENST00000590098 PRAMEF13Q5VWM6 474 aa17.18■□□□□ 0.34
PRKCSH-211ENST00000590098 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.18■□□□□ 0.34
PRKCSH-211ENST00000590098 ZNF285Q96NJ3 590 aa17.18■□□□□ 0.34
PRKCSH-211ENST00000590098 MIPEPQ99797 713 aa17.18■□□□□ 0.34
PRKCSH-211ENST00000590098 SLC26A1Q9H2B4 701 aa17.18■□□□□ 0.34
PRKCSH-211ENST00000590098 MRM3Q9HC36 420 aaKnown RBP17.18■□□□□ 0.34
PRKCSH-211ENST00000590098 SLC6A20Q9NP91 592 aa17.18■□□□□ 0.34
PRKCSH-211ENST00000590098 RUVBL2Q9Y230 463 aaKnown RBP17.18■□□□□ 0.34
PRKCSH-211ENST00000590098 COPG1Q9Y678 874 aaKnown RBP17.18■□□□□ 0.34
PRKCSH-211ENST00000590098 HYKKA2RU49 373 aa17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 FITM1A5D6W6 292 aa17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 H3BMM5 538 aa17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 FGGP02679 453 aa17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 PSMB5P28074 263 aa17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 FMO4P31512 558 aa17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 OR1D4P47884 311 aa17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 GLRBP48167 497 aa17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 CDK16Q00536 496 aa17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 ELOAQ14241 798 aaKnown RBP17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 NAA25Q14CX7 972 aa17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 RBBP7Q16576 425 aa17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 CCSMST1Q4G0I0 132 aa17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 WASHC2DQ5SRD0 308 aa17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 RNF187Q5TA31 235 aaPredicted RBP17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 SHISA6Q6ZSJ9 500 aa17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 COX15Q7KZN9 410 aa17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 METTL27Q8N6F8 245 aaPredicted RBP17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 OR2L3Q8NG85 312 aa17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 HMGCLL1Q8TB92 370 aa17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 MFSD3Q96ES6 412 aa17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 SPSB2Q99619 263 aa17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 KIFC1Q9BW19 673 aa17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 SOX17Q9H6I2 414 aaPredicted RBP17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 ZBTB20Q9HC78 741 aaPredicted RBP17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 ENAMQ9NRM1 1142 aa17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 SEMA3GQ9NS98 782 aa17.17■□□□□ 0.34
PRKCSH-211ENST00000590098 DOPEY1Q5JWR5 2465 aa17.16■□□□□ 0.34
PRKCSH-211ENST00000590098 SOCS6O14544 535 aa17.16■□□□□ 0.34
PRKCSH-211ENST00000590098 CTSVO60911 334 aa17.16■□□□□ 0.34
PRKCSH-211ENST00000590098 KCNJ1P48048 391 aa17.16■□□□□ 0.34
PRKCSH-211ENST00000590098 CTSL3PQ5NE16 218 aa17.16■□□□□ 0.34
PRKCSH-211ENST00000590098 AGAP7PQ5VUJ5 663 aa17.16■□□□□ 0.34
PRKCSH-211ENST00000590098 LRRC8BQ6P9F7 803 aa17.16■□□□□ 0.34
PRKCSH-211ENST00000590098 CES3Q6UWW8 571 aa17.16■□□□□ 0.34
PRKCSH-211ENST00000590098 Q6ZS92 163 aa17.16■□□□□ 0.34
PRKCSH-211ENST00000590098 BIRC8Q96P09 236 aa17.16■□□□□ 0.34
PRKCSH-211ENST00000590098 AGAP4Q96P64 663 aa17.16■□□□□ 0.34
PRKCSH-211ENST00000590098 TCF12Q99081 682 aa17.16■□□□□ 0.34
PRKCSH-211ENST00000590098 WDR77Q9BQA1 342 aaPredicted RBP17.16■□□□□ 0.34
PRKCSH-211ENST00000590098 ZNF304Q9HCX3 659 aa17.16■□□□□ 0.34
PRKCSH-211ENST00000590098 LZTFL1Q9NQ48 299 aa17.16■□□□□ 0.34
PRKCSH-211ENST00000590098 HOMER3Q9NSC5 361 aa17.16■□□□□ 0.34
PRKCSH-211ENST00000590098 SYBUQ9NX95 663 aa17.16■□□□□ 0.34
PRKCSH-211ENST00000590098 SPATA7Q9P0W8 599 aa17.16■□□□□ 0.34
PRKCSH-211ENST00000590098 CTSFQ9UBX1 484 aa17.16■□□□□ 0.34
PRKCSH-211ENST00000590098 ZC3H7BQ9UGR2 993 aaKnown RBP17.16■□□□□ 0.34
PRKCSH-211ENST00000590098 TSR3Q9UJK0 312 aaKnown RBP17.16■□□□□ 0.34
PRKCSH-211ENST00000590098 KLK4Q9Y5K2 254 aa17.16■□□□□ 0.34
PRKCSH-211ENST00000590098 HS3ST3B1Q9Y662 390 aa17.16■□□□□ 0.34
PRKCSH-211ENST00000590098 MAU2Q9Y6X3 613 aa17.16■□□□□ 0.34
PRKCSH-211ENST00000590098 A0A0J9YVX5 310 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 KRT87PA6NCN2 255 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 GOLGA8KD6RF30 607 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 GOLGA8TH3BQL2 631 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 ALOX12BO75342 701 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 CBX6O95503 412 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 ESR1P03372 595 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 EIF2S1P05198 315 aaKnown RBP17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 ERVK-10P10266 1014 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 PAMP19021 973 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 TPSB2P20231 275 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 CHRM3P20309 590 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 ATP5DP30049 168 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 CMPK1P30085 196 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 SARNPP82979 210 aaKnown RBP17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 OCA2Q04671 838 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 TPSAB1Q15661 275 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 TUBB8Q3ZCM7 444 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 FRMPD2BQ6IN97 320 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 KIRREL2Q6UWL6 708 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 CUZD1Q86UP6 607 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 OR2A1Q8NGT9 310 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 LPGAT1Q92604 370 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms