RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 SPIDRQ14159 915 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 SETDB1Q15047 1291 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 PCBP2Q15366 365 aaKnown RBP eCLIP11.75□□□□□ -0.53
DNMT1-218ENST00000589294 SF1Q15637 639 aaKnown RBP11.75□□□□□ -0.53
DNMT1-218ENST00000589294 PTCHD3Q3KNS1 767 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 HSP90B2PQ58FF3 399 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 TTMPQ5BVD1 217 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 SPESP1Q6UW49 350 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 LCTLQ6UWM7 567 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 ZYG11AQ6WRX3 759 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 RAB44Q7Z6P3 723 aaPredicted RBP11.75□□□□□ -0.53
DNMT1-218ENST00000589294 THOC6Q86W42 341 aaKnown RBP11.75□□□□□ -0.53
DNMT1-218ENST00000589294 CACTIN-AS1Q8N1I8 211 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 C2orf73Q8N5S3 287 aaPredicted RBP11.75□□□□□ -0.53
DNMT1-218ENST00000589294 CCDC63Q8NA47 563 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 PPFIBP2Q8ND30 876 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 OR2A1Q8NGT9 310 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 FLVCR1-AS1Q8TAF5 88 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 UBTD2Q8WUN7 234 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 EXT2Q93063 718 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 ZUFSPQ96AP4 578 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 MED8Q96G25 268 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 C1QTNF3Q9BXJ4 246 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 MED4Q9NPJ6 270 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 C1GALT1Q9NS00 363 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 INTS7Q9NVH2 962 aaKnown RBP11.75□□□□□ -0.53
DNMT1-218ENST00000589294 WWOXQ9NZC7 414 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 SEMA5BQ9P283 1151 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 POMT2Q9UKY4 750 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 KLK4Q9Y5K2 254 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 CFAP54Q96N23 3096 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 UNC13CQ8NB66 2214 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 A8MT66 165 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 K7EPI3 171 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 FTH1P19P0C7X4 201 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 HOXB3P14651 431 aaPredicted RBP11.74□□□□□ -0.53
DNMT1-218ENST00000589294 UGT2B7P16662 529 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 PEBP1P30086 187 aaKnown RBP11.74□□□□□ -0.53
DNMT1-218ENST00000589294 ETV4P43268 484 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 HSPA7P48741 367 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 DNAJB13P59910 316 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 NAA20P61599 178 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 TBPL1P62380 186 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 INSM1Q01101 510 aaPredicted RBP11.74□□□□□ -0.53
DNMT1-218ENST00000589294 ZFP36L1Q07352 338 aaKnown RBP11.74□□□□□ -0.53
DNMT1-218ENST00000589294 ASPHQ12797 758 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 TRA2AQ13595 282 aaKnown RBP eCLIP11.74□□□□□ -0.53
DNMT1-218ENST00000589294 MPP2Q14168 576 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 NAA25Q14CX7 972 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 THEMIS2Q5TEJ8 643 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 CDCP2Q5VXM1 449 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 IRGCQ6NXR0 463 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 SUSD1Q6UWL2 747 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 ZNF574Q6ZN55 896 aaPredicted RBP11.74□□□□□ -0.53
DNMT1-218ENST00000589294 RBM44Q6ZP01 1051 aaKnown RBP11.74□□□□□ -0.53
DNMT1-218ENST00000589294 LRRC70Q7Z2Q7 622 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 PTGR2Q8N8N7 351 aaPredicted RBP11.74□□□□□ -0.53
DNMT1-218ENST00000589294 ARMC2Q8NEN0 867 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 PYCR2Q96C36 320 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 GRAMD1AQ96CP6 724 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 PHF21BQ96EK2 531 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 TGM7Q96PF1 710 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 FAM111AQ96PZ2 611 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 NUDT22Q9BRQ3 303 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 TMEM79Q9BSE2 394 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 PITPNM3Q9BZ71 974 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 CHRNA10Q9GZZ6 450 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 C12orf65Q9H3J6 166 aaKnown RBP11.74□□□□□ -0.53
DNMT1-218ENST00000589294 SEMA6CQ9H3T2 930 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 OXSMQ9NWU1 459 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 GPRC5BQ9NZH0 403 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 SLC17A7Q9P2U7 560 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 COPG2Q9UBF2 871 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 ATXN7L1Q9ULK2 861 aaPredicted RBP11.74□□□□□ -0.53
DNMT1-218ENST00000589294 SLC22A14Q9Y267 594 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 KCNE2Q9Y6J6 123 aa11.74□□□□□ -0.53
DNMT1-218ENST00000589294 MN1Q10571 1320 aaPredicted RBP11.74□□□□□ -0.53
DNMT1-218ENST00000589294 A0A0J9YY10 115 aa11.73□□□□□ -0.53
DNMT1-218ENST00000589294 TMEM120BA0PK00 339 aa11.73□□□□□ -0.53
DNMT1-218ENST00000589294 TLCD2A6NGC4 264 aa11.73□□□□□ -0.53
DNMT1-218ENST00000589294 D6RAR5 112 aa11.73□□□□□ -0.53
DNMT1-218ENST00000589294 GIPC1O14908 333 aa11.73□□□□□ -0.53
DNMT1-218ENST00000589294 BIRC5O15392 142 aa11.73□□□□□ -0.53
DNMT1-218ENST00000589294 MAP3K7O43318 606 aa11.73□□□□□ -0.53
DNMT1-218ENST00000589294 WDR47O94967 919 aa11.73□□□□□ -0.53
DNMT1-218ENST00000589294 ANKRD34CP0C6C1 535 aa11.73□□□□□ -0.53
DNMT1-218ENST00000589294 GNAZP19086 355 aa11.73□□□□□ -0.53
DNMT1-218ENST00000589294 CMPK1P30085 196 aa11.73□□□□□ -0.53
DNMT1-218ENST00000589294 CSF2RBP32927 897 aa11.73□□□□□ -0.53
DNMT1-218ENST00000589294 GDF5P43026 501 aa11.73□□□□□ -0.53
DNMT1-218ENST00000589294 PIK3CGP48736 1102 aa11.73□□□□□ -0.53
DNMT1-218ENST00000589294 HERVK_113P63132 956 aa11.73□□□□□ -0.53
DNMT1-218ENST00000589294 RELAQ04206 551 aa11.73□□□□□ -0.53
DNMT1-218ENST00000589294 PCDH1Q08174 1060 aa11.73□□□□□ -0.53
DNMT1-218ENST00000589294 TSTA3Q13630 321 aaPredicted RBP11.73□□□□□ -0.53
DNMT1-218ENST00000589294 PUM1Q14671 1186 aaKnown RBP eCLIP11.73□□□□□ -0.53
DNMT1-218ENST00000589294 C18orf21Q32NC0 220 aaPredicted RBP11.73□□□□□ -0.53
DNMT1-218ENST00000589294 CCDC157Q569K6 752 aa11.73□□□□□ -0.53
DNMT1-218ENST00000589294 PRAMEF13Q5VWM6 474 aa11.73□□□□□ -0.53
DNMT1-218ENST00000589294 ICE2Q659A1 982 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms