RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 PIH1D1Q9NWS0 290 aaKnown RBP13.38□□□□□ -0.27
VMP1-209ENST00000588915 KLHL20Q9Y2M5 609 aa13.38□□□□□ -0.27
VMP1-209ENST00000588915 FAM169AQ9Y6X4 670 aa13.38□□□□□ -0.27
VMP1-209ENST00000588915 ZGRF1Q86YA3 2104 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 IGLV3-12A0A075B6K2 115 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 A0A1W2PQ72 361 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 HYKKA2RU49 373 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 PRMT5O14744 637 aaPredicted RBP13.37□□□□□ -0.27
VMP1-209ENST00000588915 USP1O94782 785 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 MCM3P25205 808 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 CCNFP41002 786 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 OR1D4P47884 311 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 TTPAP49638 278 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 CSE1LP55060 971 aaKnown RBP13.37□□□□□ -0.27
VMP1-209ENST00000588915 GDF10P55107 478 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 PRAMEP78395 509 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 TMED2Q15363 201 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 INAQ16352 499 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 WASHC2DQ5SRD0 308 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 PEX26Q7Z412 305 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 RNF214Q8ND24 703 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 OR6P1Q8NGX9 317 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 CFAP61Q8NHU2 1237 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 GSDMBQ8TAX9 411 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 STT3BQ8TCJ2 826 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 MAGEC3Q8TD91 643 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.37□□□□□ -0.27
VMP1-209ENST00000588915 RELTQ969Z4 430 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 MIEF2Q96C03 454 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 CNDP1Q96KN2 507 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 PANX3Q96QZ0 392 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 CRB3Q9BUF7 120 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 FRMD8P1Q9BZ68 369 aaPredicted RBP13.37□□□□□ -0.27
VMP1-209ENST00000588915 TRIM5Q9C035 493 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 OLAHQ9NV23 265 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 CTSFQ9UBX1 484 aa13.37□□□□□ -0.27
VMP1-209ENST00000588915 ZNF282Q9UDV7 671 aaPredicted RBP13.37□□□□□ -0.27
VMP1-209ENST00000588915 GRID2IPA4D2P6 1211 aa13.36□□□□□ -0.27
VMP1-209ENST00000588915 CTSVO60911 334 aa13.36□□□□□ -0.27
VMP1-209ENST00000588915 PHF2O75151 1096 aa13.36□□□□□ -0.27
VMP1-209ENST00000588915 ALOX12BO75342 701 aa13.36□□□□□ -0.27
VMP1-209ENST00000588915 JRKO75564 520 aa13.36□□□□□ -0.27
VMP1-209ENST00000588915 KLHL18O94889 574 aa13.36□□□□□ -0.27
VMP1-209ENST00000588915 C1orf105O95561 183 aa13.36□□□□□ -0.27
VMP1-209ENST00000588915 ZGLP1P0C6A0 271 aa13.36□□□□□ -0.27
VMP1-209ENST00000588915 ACPPP15309 386 aa13.36□□□□□ -0.27
VMP1-209ENST00000588915 ELAVL4P26378 380 aaKnown RBP13.36□□□□□ -0.27
VMP1-209ENST00000588915 VSX2P58304 361 aaPredicted RBP13.36□□□□□ -0.27
VMP1-209ENST00000588915 KLC1Q07866 573 aa13.36□□□□□ -0.27
VMP1-209ENST00000588915 Q0VFX4 171 aa13.36□□□□□ -0.27
VMP1-209ENST00000588915 MUM1Q2TAK8 710 aa13.36□□□□□ -0.27
VMP1-209ENST00000588915 ZNF324BQ6AW86 544 aaPredicted RBP13.36□□□□□ -0.27
VMP1-209ENST00000588915 SP5Q6BEB4 398 aaPredicted RBP13.36□□□□□ -0.27
VMP1-209ENST00000588915 PPP1R21Q6ZMI0 780 aa13.36□□□□□ -0.27
VMP1-209ENST00000588915 LRRC6Q86X45 466 aa13.36□□□□□ -0.27
VMP1-209ENST00000588915 KBTBD2Q8IY47 623 aa13.36□□□□□ -0.27
VMP1-209ENST00000588915 C2orf73Q8N5S3 287 aaPredicted RBP13.36□□□□□ -0.27
VMP1-209ENST00000588915 HAS2Q92819 552 aa13.36□□□□□ -0.27
VMP1-209ENST00000588915 MARVELD3Q96A59 401 aa13.36□□□□□ -0.27
VMP1-209ENST00000588915 MVB12AQ96EY5 273 aa13.36□□□□□ -0.27
VMP1-209ENST00000588915 IL17FQ96PD4 163 aa13.36□□□□□ -0.27
VMP1-209ENST00000588915 LACRTQ9GZZ8 138 aa13.36□□□□□ -0.27
VMP1-209ENST00000588915 ETNK1Q9HBU6 452 aa13.36□□□□□ -0.27
VMP1-209ENST00000588915 SLC2A6Q9UGQ3 507 aa13.36□□□□□ -0.27
VMP1-209ENST00000588915 CDC14AQ9UNH5 594 aa13.36□□□□□ -0.27
VMP1-209ENST00000588915 SVILO95425 2214 aa13.36□□□□□ -0.27
VMP1-209ENST00000588915 TRAV17A0A0B4J275 112 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 DYTNA2CJ06 578 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 SOWAHDA6NJG2 315 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 IQCF5A8MTL0 148 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 E7EVH7 732 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 MAP2K7O14733 419 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 PRPF4O43172 522 aaKnown RBP eCLIP13.35□□□□□ -0.27
VMP1-209ENST00000588915 ZG16O60844 167 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 RPS3P23396 243 aaKnown RBP eCLIP13.35□□□□□ -0.27
VMP1-209ENST00000588915 AP2B1P63010 937 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 ART3Q13508 389 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 NAA30Q147X3 362 aaPredicted RBP13.35□□□□□ -0.27
VMP1-209ENST00000588915 LINC00696Q6ZRV3 163 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 RIPOR1Q6ZS17 1223 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 SHISA6Q6ZSJ9 500 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 RNF44Q7L0R7 432 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 NDUFAF7Q7L592 441 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 TAX1BP1Q86VP1 789 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 MPP5Q8N3R9 675 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 OR2L3Q8NG85 312 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 OR1N1Q8NGS0 311 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 OR2A1Q8NGT9 310 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 MOCOSQ96EN8 888 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 ZNF778Q96MU6 729 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 FOPNLQ96NB1 174 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 CATSPERZQ9NTU4 200 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 SPATA7Q9P0W8 599 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 ZC3H7BQ9UGR2 993 aaKnown RBP13.35□□□□□ -0.27
VMP1-209ENST00000588915 GNPTGQ9UJJ9 305 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 C3orf18Q9UK00 162 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 R3HDM2Q9Y2K5 976 aaKnown RBP13.35□□□□□ -0.27
VMP1-209ENST00000588915 REXO2Q9Y3B8 237 aaKnown RBP13.35□□□□□ -0.27
VMP1-209ENST00000588915 TCAF1Q9Y4C2 921 aa13.35□□□□□ -0.27
VMP1-209ENST00000588915 NSG1A0A0A6YYJ2 146 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms