RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 ATXN3P54252 364 aaPredicted RBP8.5□□□□□ -1.05
SMAD4-206ENST00000588860 ADPRHP54922 357 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 MRPS21P82921 87 aaKnown RBP8.5□□□□□ -1.05
SMAD4-206ENST00000588860 IRF8Q02556 426 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 NFYCQ13952 458 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 RCAN2Q14206 197 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 FLOT2Q14254 428 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 CAPRIN1Q14444 709 aaKnown RBP8.5□□□□□ -1.05
SMAD4-206ENST00000588860 INPP5AQ14642 412 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 AGERQ15109 404 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 MAP7D1Q3KQU3 841 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 RFTN2Q52LD8 501 aaPredicted RBP8.5□□□□□ -1.05
SMAD4-206ENST00000588860 SAMD4BQ5PRF9 694 aaKnown RBP8.5□□□□□ -1.05
SMAD4-206ENST00000588860 CACHD1Q5VU97 1274 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 PRAMEF9Q5VWM5 478 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 LIPJQ5W064 366 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 GRHL2Q6ISB3 625 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 CAPN13Q6MZZ7 669 aaPredicted RBP8.5□□□□□ -1.05
SMAD4-206ENST00000588860 C8orf82Q6P1X6 216 aaPredicted RBP8.5□□□□□ -1.05
SMAD4-206ENST00000588860 KIAA1324Q6UXG2 1013 aaKnown RBP8.5□□□□□ -1.05
SMAD4-206ENST00000588860 UNC5DQ6UXZ4 953 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 LRRC74BQ6ZQY2 392 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 PDZD3Q86UT5 571 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 FAM124AQ86V42 546 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.5□□□□□ -1.05
SMAD4-206ENST00000588860 SYTL1Q8IYJ3 562 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 OXR1Q8N573 874 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 TP53I13Q8NBR0 393 aaPredicted RBP8.5□□□□□ -1.05
SMAD4-206ENST00000588860 FBXO15Q8NCQ5 510 aaPredicted RBP8.5□□□□□ -1.05
SMAD4-206ENST00000588860 BHLHE22Q8NFJ8 381 aaPredicted RBP8.5□□□□□ -1.05
SMAD4-206ENST00000588860 OR9A1PQ8NGU1 263 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 OR56A3Q8NH54 315 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 DNASE1L2Q92874 299 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 SLC39A3Q9BRY0 314 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 LGR4Q9BXB1 951 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 C1QTNF7Q9BXJ2 289 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 C1QTNF2Q9BXJ5 285 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 ZDHHC5Q9C0B5 715 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 MKRN2Q9H000 416 aaKnown RBP8.5□□□□□ -1.05
SMAD4-206ENST00000588860 DPEP2Q9H4A9 486 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 EBF2Q9HAK2 575 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 PRM3Q9NNZ6 103 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 SLC52A3Q9NQ40 469 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 TMEM45AQ9NWC5 275 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 C1orf109Q9NX04 203 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 ASIC5Q9NY37 505 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 MAP10Q9P2G4 905 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 SUCOQ9UBS9 1254 aaKnown RBP8.5□□□□□ -1.05
SMAD4-206ENST00000588860 SLC23A2Q9UGH3 650 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 LIMD1Q9UGP4 676 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 BCAP29Q9UHQ4 241 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 DYRK1BQ9Y463 629 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 OR1A2Q9Y585 309 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 NUP214P35658 2090 aaPredicted RBP8.49□□□□□ -1.05
SMAD4-206ENST00000588860 CEP192Q8TEP8 1941 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 TBC1D3DA0A087WVF3 549 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 TBC1D3IA0A087WXS9 549 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 TBC1D3EA0A087X179 549 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 TBC1D3KA0A087X1G2 549 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 TBC1D3FA6NER0 549 aaPredicted RBP8.49□□□□□ -1.05
SMAD4-206ENST00000588860 TBC1D3LB9A6J9 549 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 IFRD1O00458 451 aaPredicted RBP8.49□□□□□ -1.05
SMAD4-206ENST00000588860 KMOO15229 486 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 BCAS2O75934 225 aaPredicted RBP8.49□□□□□ -1.05
SMAD4-206ENST00000588860 RSL1D1O76021 490 aaKnown RBP8.49□□□□□ -1.05
SMAD4-206ENST00000588860 PAK4O96013 591 aaPredicted RBP8.49□□□□□ -1.05
SMAD4-206ENST00000588860 TBC1D3HP0C7X1 549 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 PCNAP12004 261 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 MYCLP1P12525 358 aaPredicted RBP8.49□□□□□ -1.05
SMAD4-206ENST00000588860 JAK1P23458 1154 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 ACADLP28330 430 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 MAT2AP31153 395 aaKnown RBP8.49□□□□□ -1.05
SMAD4-206ENST00000588860 IGFALSP35858 605 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 VHLP40337 213 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 TBPL1P62380 186 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 MS4A2Q01362 244 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 FOXM1Q08050 763 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 RPA4Q13156 261 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 PRKG2Q13237 762 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 SMAD4Q13485 552 aaKnown RBP8.49□□□□□ -1.05
SMAD4-206ENST00000588860 DDX39BQ13838 428 aaKnown RBP8.49□□□□□ -1.05
SMAD4-206ENST00000588860 DOC2AQ14183 400 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 TMEM259Q4ZIN3 620 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 WLSQ5T9L3 541 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 FRG2Q64ET8 278 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 TBC1D3GQ6DHY5 549 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 TBC1D3CQ6IPX1 549 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 SLC2A7Q6PXP3 512 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 C11orf96Q7Z7L8 435 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 HORMAD1Q86X24 394 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 GALNT13Q8IUC8 556 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 TBC1D3Q8IZP1 549 aaPredicted RBP8.49□□□□□ -1.05
SMAD4-206ENST00000588860 SLC44A3Q8N4M1 653 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 FAM156AQ8NDB6 213 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 PROKR1Q8TCW9 393 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 ZNF480Q8WV37 535 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 FAM131CQ96AQ9 280 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 LRRC58Q96CX6 371 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 SIPA1Q96FS4 1042 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 CMTM7Q96FZ5 175 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms