RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 UFM1P61960 85 aa14.26□□□□□ -0.13
CCDC43-203ENST00000588210 BCL2L1Q07817 233 aa14.26□□□□□ -0.13
CCDC43-203ENST00000588210 GPRIN3Q6ZVF9 776 aa14.26□□□□□ -0.13
CCDC43-203ENST00000588210 OR2T11Q8NH01 316 aa14.26□□□□□ -0.13
CCDC43-203ENST00000588210 LZICQ8WZA0 190 aa14.26□□□□□ -0.13
CCDC43-203ENST00000588210 RAB7BQ96AH8 199 aa14.26□□□□□ -0.13
CCDC43-203ENST00000588210 NSMCE3Q96MG7 304 aa14.26□□□□□ -0.13
CCDC43-203ENST00000588210 HGH1Q9BTY7 390 aa14.26□□□□□ -0.13
CCDC43-203ENST00000588210 TRIM8Q9BZR9 551 aa14.26□□□□□ -0.13
CCDC43-203ENST00000588210 SMPD3Q9NY59 655 aaPredicted RBP14.26□□□□□ -0.13
CCDC43-203ENST00000588210 ZNF639Q9UID6 485 aa14.26□□□□□ -0.13
CCDC43-203ENST00000588210 SPAG17Q6Q759 2223 aa14.25□□□□□ -0.13
CCDC43-203ENST00000588210 THADAQ6YHU6 1953 aa14.25□□□□□ -0.13
CCDC43-203ENST00000588210 METTL12A8MUP2 240 aa14.25□□□□□ -0.13
CCDC43-203ENST00000588210 EI24O14681 340 aa14.25□□□□□ -0.13
CCDC43-203ENST00000588210 ENO2P09104 434 aaPredicted RBP14.25□□□□□ -0.13
CCDC43-203ENST00000588210 ADRB3P13945 408 aa14.25□□□□□ -0.13
CCDC43-203ENST00000588210 DHPSP49366 369 aaPredicted RBP14.25□□□□□ -0.13
CCDC43-203ENST00000588210 RBBP7Q16576 425 aa14.25□□□□□ -0.13
CCDC43-203ENST00000588210 FBXO48Q5FWF7 155 aa14.25□□□□□ -0.13
CCDC43-203ENST00000588210 UGT3A1Q6NUS8 523 aa14.25□□□□□ -0.13
CCDC43-203ENST00000588210 PARS2Q7L3T8 475 aaKnown RBP14.25□□□□□ -0.13
CCDC43-203ENST00000588210 PROSER1Q86XN7 944 aa14.25□□□□□ -0.13
CCDC43-203ENST00000588210 ZNF382Q96SR6 550 aa14.25□□□□□ -0.13
CCDC43-203ENST00000588210 SLC30A3Q99726 388 aa14.25□□□□□ -0.13
CCDC43-203ENST00000588210 TDRD1Q9BXT4 1180 aaKnown RBP14.25□□□□□ -0.13
CCDC43-203ENST00000588210 TRMT6Q9UJA5 497 aaKnown RBP14.25□□□□□ -0.13
CCDC43-203ENST00000588210 SCN8AQ9UQD0 1980 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 A0A1W2PQ67 120 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 C2orf81A6NN90 581 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 E2F3O00716 465 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 PFDN6O15212 129 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 CLOCKO15516 846 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 RETP07949 1114 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 RPL10P27635 214 aaKnown RBP14.24□□□□□ -0.13
CCDC43-203ENST00000588210 PTGER3P43115 390 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 TTPAP49638 278 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 HK3P52790 923 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 EMX2Q04743 252 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 TIGD2Q4W5G0 525 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 CTSL3PQ5NE16 218 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 LYSMD4Q5XG99 296 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 NEK5Q6P3R8 708 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 BRAT1Q6PJG6 821 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 ABRAXAS1Q6UWZ7 409 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 PATL1Q86TB9 770 aaKnown RBP14.24□□□□□ -0.13
CCDC43-203ENST00000588210 GPR180Q86V85 440 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 IFNEQ86WN2 208 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 ZFAND4Q86XD8 727 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 DPP10Q8N608 796 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 DEFB119Q8N690 84 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 CD200R1Q8TD46 325 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 ISOC1Q96CN7 298 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 RMDN1Q96DB5 314 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 HSPA12BQ96MM6 686 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 C6orf106Q9H6K1 298 aaPredicted RBP14.24□□□□□ -0.13
CCDC43-203ENST00000588210 LIN28AQ9H9Z2 209 aaKnown RBP14.24□□□□□ -0.13
CCDC43-203ENST00000588210 PREBQ9HCU5 417 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 GALPQ9UBC7 116 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 GMEB2Q9UKD1 530 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 PCDHGA5Q9Y5G8 931 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 FADS3Q9Y5Q0 445 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 GMEB1Q9Y692 573 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 TBC1D3DA0A087WVF3 549 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 TBC1D3IA0A087WXS9 549 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 TBC1D3EA0A087X179 549 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 TBC1D3KA0A087X1G2 549 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 TSPAN11A1L157 253 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 TBC1D3FA6NER0 549 aaPredicted RBP14.24□□□□□ -0.13
CCDC43-203ENST00000588210 PRR23AA6NEV1 266 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 NCF1BA6NI72 391 aaPredicted RBP14.24□□□□□ -0.13
CCDC43-203ENST00000588210 NCF1CA8MVU1 366 aaPredicted RBP14.24□□□□□ -0.13
CCDC43-203ENST00000588210 TBC1D3LB9A6J9 549 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 GIPC1O14908 333 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 SOCS5O75159 536 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 NIPSNAP2O75323 286 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 EPN2O95208 641 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 LDLRP01130 860 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 PRLP01236 227 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 TBC1D3HP0C7X1 549 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 NCF1P14598 390 aaPredicted RBP14.24□□□□□ -0.13
CCDC43-203ENST00000588210 NCK1P16333 377 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 LPOP22079 712 aaPredicted RBP14.24□□□□□ -0.13
CCDC43-203ENST00000588210 HRH2P25021 359 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 VARSP26640 1264 aaKnown RBP14.24□□□□□ -0.13
CCDC43-203ENST00000588210 NUP107P57740 925 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 TAS2R38P59533 333 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 WDR45BQ5MNZ6 344 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 C6orf136Q5SQH8 315 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 TBC1D3GQ6DHY5 549 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 TBC1D3CQ6IPX1 549 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 NANOGP8Q6NSW7 305 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 PSAPL1Q6NUJ1 521 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 USP51Q70EK9 711 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 CLVS1Q8IUQ0 354 aaPredicted RBP14.24□□□□□ -0.13
CCDC43-203ENST00000588210 TBC1D3Q8IZP1 549 aaPredicted RBP14.24□□□□□ -0.13
CCDC43-203ENST00000588210 DHRSXQ8N5I4 330 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 CYGBQ8WWM9 190 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 ECHDC3Q96DC8 303 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 LINGO1Q96FE5 620 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms