RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 GGTA1PQ4G0N0 100 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 PRAMEF13Q5VWM6 474 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 DBX2Q6ZNG2 339 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 GATAD2AQ86YP4 633 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 CRLF3Q8IUI8 442 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 ADGRF3Q8IZF5 1079 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 CHCHD4Q8N4Q1 142 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 MINDY1Q8N5J2 469 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 ZNF781Q8N8C0 355 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 LMNTD1Q8N9Z9 388 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 OR52B6Q8NGF0 335 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 WDR34Q96EX3 536 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 MED8Q96G25 268 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.6■□□□□ 0.09
SS18-226ENST00000585241 SRMSQ9H3Y6 488 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 EHD1Q9H4M9 534 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 TNFRSF12AQ9NP84 129 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 KCNE2Q9Y6J6 123 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 OTOGLQ3ZCN5 2332 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 MUC6Q6W4X9 2439 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 USP34Q70CQ2 3546 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 A0A1B0GTL3 188 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 BTN3A3O00478 584 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 TRIM38O00635 465 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 PRAMEF4O60810 478 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 CHRM5P08912 532 aaPredicted RBP15.59■□□□□ 0.09
SS18-226ENST00000585241 EBLN1P0CF75 366 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 MPSTP25325 297 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 PRDX3P30048 256 aaKnown RBP15.59■□□□□ 0.09
SS18-226ENST00000585241 CASP2P42575 452 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 HK2P52789 917 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 EPHA4P54764 986 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 PLCL1Q15111 1095 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 TBCCQ15814 346 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 PRAMEF9Q5VWM5 478 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 CGB2Q6NT52 195 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 SUSD1Q6UWL2 747 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 GPRIN3Q6ZVF9 776 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 SYVN1Q86TM6 617 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 HOMEZQ8IX15 550 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 SNX31Q8N9S9 440 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 L3MBTL4Q8NA19 623 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 OR4E2Q8NGC2 313 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 OR2A1Q8NGT9 310 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 OR2I1PQ8NGU4 316 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 FLVCR1-AS1Q8TAF5 88 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 PIWIL2Q8TC59 973 aaKnown RBP15.59■□□□□ 0.09
SS18-226ENST00000585241 MAGEB10Q96LZ2 347 aaPredicted RBP15.59■□□□□ 0.09
SS18-226ENST00000585241 MID1IP1Q9NPA3 183 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 TRPS1Q9UHF7 1281 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 ZDHHC2Q9UIJ5 367 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 ENTPD2Q9Y5L3 495 aa15.59■□□□□ 0.09
SS18-226ENST00000585241 GOLGA4Q13439 2230 aaKnown RBP15.59■□□□□ 0.09
SS18-226ENST00000585241 KCNE1BA0A087WTH5 132 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 LY6G6EA0A0G2JKS1 128 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 WFS1O76024 890 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 FKBP9O95302 570 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 ENO1P06733 434 aaKnown RBP15.58■□□□□ 0.08
SS18-226ENST00000585241 ALOX15P16050 662 aaPredicted RBP15.58■□□□□ 0.08
SS18-226ENST00000585241 GLB1P16278 677 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 GNAZP19086 355 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 RPL14P50914 215 aaKnown RBP15.58■□□□□ 0.08
SS18-226ENST00000585241 CCNG1P51959 295 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 ERVPABLB-1P60509 514 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 ABATP80404 500 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 CBX1P83916 185 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 KIR2DS3Q14952 304 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 RBBP7Q16576 425 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 KANK2Q63ZY3 851 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 LETMD1Q6P1Q0 360 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 SLCO4C1Q6ZQN7 724 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 OR4F6Q8NGB9 312 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 OR6C4Q8NGE1 309 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 SLC5A11Q8WWX8 675 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 JPH3Q8WXH2 748 aaPredicted RBP15.58■□□□□ 0.08
SS18-226ENST00000585241 ATOH1Q92858 354 aaPredicted RBP15.58■□□□□ 0.08
SS18-226ENST00000585241 NEIL2Q969S2 332 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 SLC22A18Q96BI1 424 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 GTPBP2Q9BX10 602 aaKnown RBP15.58■□□□□ 0.08
SS18-226ENST00000585241 NSRP1Q9H0G5 558 aaKnown RBP15.58■□□□□ 0.08
SS18-226ENST00000585241 SPHK1Q9NYA1 384 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 TAC3Q9UHF0 121 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 DYRK1BQ9Y463 629 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 PCDHB11Q9Y5F2 797 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 RNF215Q9Y6U7 377 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 U3KQA8 63 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 WDFY4Q6ZS81 3184 aa15.58■□□□□ 0.08
SS18-226ENST00000585241 RALGAPA1Q6GYQ0 2036 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 OR5K3A6NET4 321 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 E7EQ34 232 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 SLCO1B7G3V0H7 640 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 MATN2O00339 956 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 CLGNO14967 610 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 AZIN1O14977 448 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 SIGLEC6O43699 453 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 OR4F21O95013 312 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 CCNDBP1O95273 360 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 CLDN9O95484 217 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 FAM107AO95990 144 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 LMNAP02545 664 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms