RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 GPR21Q99679 349 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 EBNA1BP2Q99848 306 aaKnown RBP20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 C17orf62Q9BQA9 187 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 FAM167BQ9BTA0 163 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 DHRS4Q9BTZ2 278 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 ACAT2Q9BWD1 397 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 EPN3Q9H201 632 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 FAM114A2Q9NRY5 505 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 KLHL42Q9P2K6 505 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 GPN3Q9UHW5 284 aaPredicted RBP20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 ANAPC2Q9UJX6 822 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 PADI2Q9Y2J8 665 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 DHRS7Q9Y394 339 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 CNOT3O75175 753 aaKnown RBP20.57■□□□□ 0.88
PPP4R1-228ENST00000584074 CATP04040 527 aaKnown RBP20.57■□□□□ 0.88
PPP4R1-228ENST00000584074 ERGP11308 486 aa20.57■□□□□ 0.88
PPP4R1-228ENST00000584074 FOXL2P58012 376 aa20.57■□□□□ 0.88
PPP4R1-228ENST00000584074 BBS9Q3SYG4 887 aa20.57■□□□□ 0.88
PPP4R1-228ENST00000584074 SUSD1Q6UWL2 747 aa20.57■□□□□ 0.88
PPP4R1-228ENST00000584074 TTLL10Q6ZVT0 673 aa20.57■□□□□ 0.88
PPP4R1-228ENST00000584074 NEK10Q6ZWH5 1172 aa20.57■□□□□ 0.88
PPP4R1-228ENST00000584074 INPP5DQ92835 1189 aa20.57■□□□□ 0.88
PPP4R1-228ENST00000584074 PWWP2AQ96N64 755 aa20.57■□□□□ 0.88
PPP4R1-228ENST00000584074 SPENQ96T58 3664 aaKnown RBP20.57■□□□□ 0.88
PPP4R1-228ENST00000584074 PKP4Q99569 1192 aa20.57■□□□□ 0.88
PPP4R1-228ENST00000584074 NAPGQ99747 312 aaPredicted RBP20.57■□□□□ 0.88
PPP4R1-228ENST00000584074 SELENOSQ9BQE4 189 aa20.57■□□□□ 0.88
PPP4R1-228ENST00000584074 AARSD1Q9BTE6 412 aaKnown RBP20.57■□□□□ 0.88
PPP4R1-228ENST00000584074 ACSS2Q9NR19 701 aa20.57■□□□□ 0.88
PPP4R1-228ENST00000584074 SLC22A11Q9NSA0 550 aa20.57■□□□□ 0.88
PPP4R1-228ENST00000584074 PTRH2Q9Y3E5 179 aaKnown RBP20.57■□□□□ 0.88
PPP4R1-228ENST00000584074 KLK4Q9Y5K2 254 aa20.57■□□□□ 0.88
PPP4R1-228ENST00000584074 SAR1BQ9Y6B6 198 aa20.57■□□□□ 0.88
PPP4R1-228ENST00000584074 COMMD10Q9Y6G5 202 aa20.57■□□□□ 0.88
PPP4R1-228ENST00000584074 SNRNP200O75643 2136 aaKnown RBP20.56■□□□□ 0.88
PPP4R1-228ENST00000584074 ITGAXP20702 1163 aa20.56■□□□□ 0.88
PPP4R1-228ENST00000584074 OTX2P32243 289 aa20.56■□□□□ 0.88
PPP4R1-228ENST00000584074 CASRP41180 1078 aa20.56■□□□□ 0.88
PPP4R1-228ENST00000584074 DR1Q01658 176 aa20.56■□□□□ 0.88
PPP4R1-228ENST00000584074 KCNC4Q03721 635 aa20.56■□□□□ 0.88
PPP4R1-228ENST00000584074 ATP1A4Q13733 1029 aa20.56■□□□□ 0.88
PPP4R1-228ENST00000584074 HP1BP3Q5SSJ5 553 aaPredicted RBP20.56■□□□□ 0.88
PPP4R1-228ENST00000584074 FRMPD2BQ6IN97 320 aa20.56■□□□□ 0.88
PPP4R1-228ENST00000584074 CYHR1Q6ZMK1 362 aa20.56■□□□□ 0.88
PPP4R1-228ENST00000584074 TMEM151BQ8IW70 566 aa20.56■□□□□ 0.88
PPP4R1-228ENST00000584074 C2CD4AQ8NCU7 369 aaPredicted RBP20.56■□□□□ 0.88
PPP4R1-228ENST00000584074 CD200R1Q8TD46 325 aa20.56■□□□□ 0.88
PPP4R1-228ENST00000584074 ASB11Q8WXH4 323 aa20.56■□□□□ 0.88
PPP4R1-228ENST00000584074 SMPDL3AQ92484 453 aa20.56■□□□□ 0.88
PPP4R1-228ENST00000584074 DLG3Q92796 817 aa20.56■□□□□ 0.88
PPP4R1-228ENST00000584074 ZNF285Q96NJ3 590 aa20.56■□□□□ 0.88
PPP4R1-228ENST00000584074 NDOR1Q9UHB4 597 aa20.56■□□□□ 0.88
PPP4R1-228ENST00000584074 UBR5O95071 2799 aaPredicted RBP20.55■□□□□ 0.88
PPP4R1-228ENST00000584074 FANCGO15287 622 aa20.55■□□□□ 0.88
PPP4R1-228ENST00000584074 TTC4O95801 387 aa20.55■□□□□ 0.88
PPP4R1-228ENST00000584074 SLC16A8O95907 504 aa20.55■□□□□ 0.88
PPP4R1-228ENST00000584074 GABRB3P28472 473 aa20.55■□□□□ 0.88
PPP4R1-228ENST00000584074 CSRP3P50461 194 aa20.55■□□□□ 0.88
PPP4R1-228ENST00000584074 ARSFP54793 590 aa20.55■□□□□ 0.88
PPP4R1-228ENST00000584074 VSX2P58304 361 aaPredicted RBP20.55■□□□□ 0.88
PPP4R1-228ENST00000584074 KLRB1Q12918 225 aa20.55■□□□□ 0.88
PPP4R1-228ENST00000584074 TSTA3Q13630 321 aaPredicted RBP20.55■□□□□ 0.88
PPP4R1-228ENST00000584074 GRM7Q14831 915 aa20.55■□□□□ 0.88
PPP4R1-228ENST00000584074 ARHGAP19Q14CB8 494 aa20.55■□□□□ 0.88
PPP4R1-228ENST00000584074 TCTE1Q5JU00 501 aa20.55■□□□□ 0.88
PPP4R1-228ENST00000584074 SPANXN3Q5MJ09 141 aa20.55■□□□□ 0.88
PPP4R1-228ENST00000584074 MRPL14Q6P1L8 145 aaKnown RBP20.55■□□□□ 0.88
PPP4R1-228ENST00000584074 SYDE1Q6ZW31 735 aaPredicted RBP20.55■□□□□ 0.88
PPP4R1-228ENST00000584074 CPNE9Q8IYJ1 553 aa20.55■□□□□ 0.88
PPP4R1-228ENST00000584074 NDNQ99608 321 aa20.55■□□□□ 0.88
PPP4R1-228ENST00000584074 TRIM51Q9BSJ1 452 aa20.55■□□□□ 0.88
PPP4R1-228ENST00000584074 DPH7Q9BTV6 452 aa20.55■□□□□ 0.88
PPP4R1-228ENST00000584074 SLC25A23Q9BV35 468 aa20.55■□□□□ 0.88
PPP4R1-228ENST00000584074 PLAC1Q9HBJ0 212 aa20.55■□□□□ 0.88
PPP4R1-228ENST00000584074 SLC6A20Q9NP91 592 aa20.55■□□□□ 0.88
PPP4R1-228ENST00000584074 LOC105369274A0A096LPK9 316 aa20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 LOC102723532A0A0G2JNH3 316 aa20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 A0A0J9YVX5 310 aa20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 A0A1B0GX78 115 aa20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 GFYI3L273 518 aa20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 VPS26AO75436 327 aa20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 SYF2O95926 243 aaKnown RBP20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 MPC1LP0DKB6 136 aa20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 ENO3P13929 434 aaPredicted RBP20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 CMPK1P30085 196 aa20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 RPA3P35244 121 aaPredicted RBP20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 FOLR3P41439 243 aa20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 PNLIPRP1P54315 467 aa20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 TIAL1Q01085 375 aaKnown RBP eCLIP20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 MORF4L2Q15014 288 aa20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 WASHC2DQ5SRD0 308 aa20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 PIWIL4Q7Z3Z4 852 aaKnown RBP20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 MRGPREQ86SM8 312 aa20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 RAB43Q86YS6 212 aa20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 OR4N4Q8N0Y3 316 aa20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 TEX19Q8NA77 164 aa20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 FBXO15Q8NCQ5 510 aaPredicted RBP20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 PPFIBP2Q8ND30 876 aa20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 OR2Y1Q8NGV0 311 aa20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 ZNF480Q8WV37 535 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms