RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 CHI3L2Q15782 390 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 NKAIN2Q5VXU1 208 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 METTL2BQ6P1Q9 378 aaKnown RBP9.21□□□□□ -0.94
RFFL-210ENST00000582308 ZCCHC23Q6ZST2 131 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 SPRED1Q7Z699 444 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 RAB44Q7Z6P3 723 aaPredicted RBP9.21□□□□□ -0.94
RFFL-210ENST00000582308 THOC6Q86W42 341 aaKnown RBP9.21□□□□□ -0.94
RFFL-210ENST00000582308 FAM20CQ8IXL6 584 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 ARFGAP2Q8N6H7 521 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 TEX9Q8N6V9 391 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 CCNYL1Q8N7R7 359 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 OR2A1Q8NGT9 310 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 OR10G6Q8NH81 332 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 FAM76AQ8TAV0 307 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 IFI44Q8TCB0 444 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 ZNF483Q8TF39 744 aaPredicted RBP9.21□□□□□ -0.94
RFFL-210ENST00000582308 NAT6Q93015 286 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 OR2A14Q96R47 310 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 CCDC3Q9BQI4 270 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 ACAT2Q9BWD1 397 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 SLC32A1Q9H598 525 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 ZBTB26Q9HCK0 441 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 CCDC177Q9NQR7 707 aaPredicted RBP9.21□□□□□ -0.94
RFFL-210ENST00000582308 ABCF3Q9NUQ8 709 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 INTS9Q9NV88 658 aaKnown RBP9.21□□□□□ -0.94
RFFL-210ENST00000582308 HRASLS2Q9NWW9 162 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 KCNK4Q9NYG8 393 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 ACTR10Q9NZ32 417 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 OPTCQ9UBM4 332 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 FTSJ1Q9UET6 329 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 PCTPQ9UKL6 214 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 SH2B3Q9UQQ2 575 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 SLC22A14Q9Y267 594 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 SPEGQ15772 3267 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 GSAPA4D1B5 854 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 ISM1B1AKI9 464 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 PPP6CO00743 305 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 GFRA3O60609 400 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 PRAMEF4O60810 478 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 SUPT7LO94864 414 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 UGT2B7P16662 529 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 TSPAN8P19075 237 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 BGNP21810 368 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 CCND1P24385 295 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 ACP1P24666 158 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 ARRB2P32121 409 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 CSF2RBP32927 897 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 CCR10P46092 362 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 CAPZBP47756 277 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 LSSP48449 732 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 LIMK1P53667 647 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 GYS2P54840 703 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 CDH13P55290 713 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 GPLD1P80108 840 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 SQSTM1Q13501 440 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 GTF2H2Q13888 395 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 KIR2DS3Q14952 304 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 AMZ1Q400G9 498 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 PRAMEF9Q5VWM5 478 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 PRAMEF13Q5VWM6 474 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 CAPN13Q6MZZ7 669 aaPredicted RBP9.2□□□□□ -0.94
RFFL-210ENST00000582308 GTF2H2CQ6P1K8 395 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 ATG14Q6ZNE5 492 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 USP53Q70EK8 1073 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 LRRC70Q7Z2Q7 622 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 GOLGA7Q7Z5G4 137 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 OOSP2Q86WS3 158 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 KIAA2013Q8IYS2 634 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 SNX31Q8N9S9 440 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 NCSTNQ92542 709 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 ZNF75CPQ92670 426 aaPredicted RBP9.2□□□□□ -0.94
RFFL-210ENST00000582308 PPM1MQ96MI6 270 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 CDC6Q99741 560 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 ABCG4Q9H172 646 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 GSTO2Q9H4Y5 243 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 DNAJC11Q9NVH1 559 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 EVA1BQ9NVM1 165 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 TAC3Q9UHF0 121 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 PCDHB11Q9Y5F2 797 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 ENTPD2Q9Y5L3 495 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 CFAP54Q96N23 3096 aa9.2□□□□□ -0.94
RFFL-210ENST00000582308 IGKV1-8A0A0C4DH67 115 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 A0A1B0GTL3 188 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 A0A1W2PQM1 296 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 C2orf74A8MZ97 194 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 UBFD1O14562 309 aaKnown RBP9.19□□□□□ -0.94
RFFL-210ENST00000582308 OR7A17O14581 309 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 TM4SF5O14894 197 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 CAPN5O15484 640 aaPredicted RBP9.19□□□□□ -0.94
RFFL-210ENST00000582308 TNFSF14O43557 240 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 ITM2AO43736 263 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 SERPINE1P05121 402 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 HOXB3P14651 431 aaPredicted RBP9.19□□□□□ -0.94
RFFL-210ENST00000582308 EPB42P16452 691 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 PRDX3P30048 256 aaKnown RBP9.19□□□□□ -0.94
RFFL-210ENST00000582308 ACADVLP49748 655 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 GFERP55789 205 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 GUCY1A3Q02108 690 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 CLCQ05315 142 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 PRDX1Q06830 199 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms