RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 TXLNGQ9NUQ3 528 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 ZC3H7BQ9UGR2 993 aaKnown RBP18.73■□□□□ 0.59
SREBF1-220ENST00000581707 TCFL5Q9UL49 500 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 SRPK3Q9UPE1 567 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 CHMP2BQ9UQN3 213 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 HEMK1Q9Y5R4 338 aaPredicted RBP18.73■□□□□ 0.59
SREBF1-220ENST00000581707 FER1L5A0AVI2 2057 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 EFCAB8A8MWE9 144 aa18.72■□□□□ 0.59
SREBF1-220ENST00000581707 GABRB3P28472 473 aa18.72■□□□□ 0.59
SREBF1-220ENST00000581707 HSD17B2P37059 387 aa18.72■□□□□ 0.59
SREBF1-220ENST00000581707 CARSP49589 748 aaKnown RBP18.72■□□□□ 0.59
SREBF1-220ENST00000581707 NCF4Q15080 339 aa18.72■□□□□ 0.59
SREBF1-220ENST00000581707 UGT3A1Q6NUS8 523 aa18.72■□□□□ 0.59
SREBF1-220ENST00000581707 KIAA0408Q6ZU52 694 aa18.72■□□□□ 0.59
SREBF1-220ENST00000581707 CNTN4Q8IWV2 1026 aa18.72■□□□□ 0.59
SREBF1-220ENST00000581707 CPNE9Q8IYJ1 553 aa18.72■□□□□ 0.59
SREBF1-220ENST00000581707 FBXO15Q8NCQ5 510 aaPredicted RBP18.72■□□□□ 0.59
SREBF1-220ENST00000581707 C9orf43Q8TAL5 461 aaPredicted RBP18.72■□□□□ 0.59
SREBF1-220ENST00000581707 PROKR1Q8TCW9 393 aa18.72■□□□□ 0.59
SREBF1-220ENST00000581707 SMPDL3AQ92484 453 aa18.72■□□□□ 0.59
SREBF1-220ENST00000581707 ABHD17AQ96GS6 310 aa18.72■□□□□ 0.59
SREBF1-220ENST00000581707 GBP5Q96PP8 586 aa18.72■□□□□ 0.59
SREBF1-220ENST00000581707 NDNQ99608 321 aa18.72■□□□□ 0.59
SREBF1-220ENST00000581707 C17orf62Q9BQA9 187 aa18.72■□□□□ 0.59
SREBF1-220ENST00000581707 ACAT2Q9BWD1 397 aa18.72■□□□□ 0.59
SREBF1-220ENST00000581707 PLAC1Q9HBJ0 212 aa18.72■□□□□ 0.59
SREBF1-220ENST00000581707 DHCR7Q9UBM7 475 aaKnown RBP18.72■□□□□ 0.59
SREBF1-220ENST00000581707 TRMT6Q9UJA5 497 aaKnown RBP18.72■□□□□ 0.59
SREBF1-220ENST00000581707 KLK4Q9Y5K2 254 aa18.72■□□□□ 0.59
SREBF1-220ENST00000581707 TEX264Q9Y6I9 313 aa18.72■□□□□ 0.59
SREBF1-220ENST00000581707 ZNF839A8K0R7 811 aa18.71■□□□□ 0.59
SREBF1-220ENST00000581707 GFYI3L273 518 aa18.71■□□□□ 0.59
SREBF1-220ENST00000581707 ZBTB14O43829 449 aa18.71■□□□□ 0.59
SREBF1-220ENST00000581707 AHSGP02765 367 aa18.71■□□□□ 0.59
SREBF1-220ENST00000581707 MCM3P25205 808 aa18.71■□□□□ 0.59
SREBF1-220ENST00000581707 CASQ1P31415 396 aa18.71■□□□□ 0.59
SREBF1-220ENST00000581707 SKIV2L2P42285 1042 aaKnown RBP18.71■□□□□ 0.59
SREBF1-220ENST00000581707 PMS2P54278 862 aa18.71■□□□□ 0.59
SREBF1-220ENST00000581707 PNLIPRP1P54315 467 aa18.71■□□□□ 0.59
SREBF1-220ENST00000581707 DCDP81605 110 aaKnown RBP18.71■□□□□ 0.59
SREBF1-220ENST00000581707 NFKB2Q00653 900 aa18.71■□□□□ 0.59
SREBF1-220ENST00000581707 TEDDM1Q5T9Z0 273 aa18.71■□□□□ 0.59
SREBF1-220ENST00000581707 FAM69BQ5VUD6 431 aa18.71■□□□□ 0.59
SREBF1-220ENST00000581707 MLIPQ5VWP3 458 aa18.71■□□□□ 0.59
SREBF1-220ENST00000581707 SUSD1Q6UWL2 747 aa18.71■□□□□ 0.59
SREBF1-220ENST00000581707 PRICKLE2Q7Z3G6 844 aa18.71■□□□□ 0.59
SREBF1-220ENST00000581707 APLFQ8IW19 511 aaPredicted RBP18.71■□□□□ 0.59
SREBF1-220ENST00000581707 SELENOSQ9BQE4 189 aa18.71■□□□□ 0.59
SREBF1-220ENST00000581707 DHRS4Q9BTZ2 278 aa18.71■□□□□ 0.59
SREBF1-220ENST00000581707 TAS2R13Q9NYV9 303 aa18.71■□□□□ 0.59
SREBF1-220ENST00000581707 GPN3Q9UHW5 284 aaPredicted RBP18.71■□□□□ 0.59
SREBF1-220ENST00000581707 SNX24Q9Y343 169 aa18.71■□□□□ 0.59
SREBF1-220ENST00000581707 CCDC88CQ9P219 2028 aa18.71■□□□□ 0.59
SREBF1-220ENST00000581707 MKRN2OSH3BPM6 223 aa18.7■□□□□ 0.58
SREBF1-220ENST00000581707 EIF3FO00303 357 aaPredicted RBP18.7■□□□□ 0.58
SREBF1-220ENST00000581707 TP73O15350 636 aa18.7■□□□□ 0.58
SREBF1-220ENST00000581707 SLC28A2O43868 658 aa18.7■□□□□ 0.58
SREBF1-220ENST00000581707 CTSVO60911 334 aa18.7■□□□□ 0.58
SREBF1-220ENST00000581707 RFPL1O75677 317 aa18.7■□□□□ 0.58
SREBF1-220ENST00000581707 SLC16A8O95907 504 aa18.7■□□□□ 0.58
SREBF1-220ENST00000581707 SYF2O95926 243 aaKnown RBP18.7■□□□□ 0.58
SREBF1-220ENST00000581707 ATXN8OSP0DMR3 200 aa18.7■□□□□ 0.58
SREBF1-220ENST00000581707 ALAS2P22557 587 aa18.7■□□□□ 0.58
SREBF1-220ENST00000581707 CMPK1P30085 196 aa18.7■□□□□ 0.58
SREBF1-220ENST00000581707 RPA3P35244 121 aaPredicted RBP18.7■□□□□ 0.58
SREBF1-220ENST00000581707 RPL21P46778 160 aaKnown RBP18.7■□□□□ 0.58
SREBF1-220ENST00000581707 ARSFP54793 590 aa18.7■□□□□ 0.58
SREBF1-220ENST00000581707 ETF1P62495 437 aaKnown RBP18.7■□□□□ 0.58
SREBF1-220ENST00000581707 TIAL1Q01085 375 aaKnown RBP eCLIP18.7■□□□□ 0.58
SREBF1-220ENST00000581707 TSTA3Q13630 321 aaPredicted RBP18.7■□□□□ 0.58
SREBF1-220ENST00000581707 NAA25Q14CX7 972 aa18.7■□□□□ 0.58
SREBF1-220ENST00000581707 TCTE1Q5JU00 501 aa18.7■□□□□ 0.58
SREBF1-220ENST00000581707 RBM20Q5T481 1227 aaKnown RBP18.7■□□□□ 0.58
SREBF1-220ENST00000581707 STEAP4Q687X5 459 aa18.7■□□□□ 0.58
SREBF1-220ENST00000581707 TRMT10BQ6PF06 316 aaKnown RBP18.7■□□□□ 0.58
SREBF1-220ENST00000581707 PIWIL4Q7Z3Z4 852 aaKnown RBP18.7■□□□□ 0.58
SREBF1-220ENST00000581707 GALNT7Q86SF2 657 aa18.7■□□□□ 0.58
SREBF1-220ENST00000581707 ANKMY2Q8IV38 441 aa18.7■□□□□ 0.58
SREBF1-220ENST00000581707 SPATA4Q8NEY3 305 aa18.7■□□□□ 0.58
SREBF1-220ENST00000581707 DLG3Q92796 817 aa18.7■□□□□ 0.58
SREBF1-220ENST00000581707 WDR83Q9BRX9 315 aaKnown RBP18.7■□□□□ 0.58
SREBF1-220ENST00000581707 ZNF71Q9NQZ8 489 aaPredicted RBP18.7■□□□□ 0.58
SREBF1-220ENST00000581707 IFT80Q9P2H3 777 aaPredicted RBP18.7■□□□□ 0.58
SREBF1-220ENST00000581707 PADI2Q9Y2J8 665 aa18.7■□□□□ 0.58
SREBF1-220ENST00000581707 BSNQ9UPA5 3926 aa18.69■□□□□ 0.58
SREBF1-220ENST00000581707 J3QKU1 62 aa18.69■□□□□ 0.58
SREBF1-220ENST00000581707 NDC80O14777 642 aa18.69■□□□□ 0.58
SREBF1-220ENST00000581707 SRPX2O60687 465 aaPredicted RBP18.69■□□□□ 0.58
SREBF1-220ENST00000581707 GCGRP47871 477 aa18.69■□□□□ 0.58
SREBF1-220ENST00000581707 RGS4P49798 205 aa18.69■□□□□ 0.58
SREBF1-220ENST00000581707 CDKN2DP55273 166 aa18.69■□□□□ 0.58
SREBF1-220ENST00000581707 VSX2P58304 361 aaPredicted RBP18.69■□□□□ 0.58
SREBF1-220ENST00000581707 YBX1P67809 324 aaKnown RBP18.69■□□□□ 0.58
SREBF1-220ENST00000581707 MRPS25P82663 173 aaKnown RBP18.69■□□□□ 0.58
SREBF1-220ENST00000581707 PDIA2Q13087 525 aaKnown RBP18.69■□□□□ 0.58
SREBF1-220ENST00000581707 GRM7Q14831 915 aa18.69■□□□□ 0.58
SREBF1-220ENST00000581707 NKAIN1Q4KMZ8 207 aa18.69■□□□□ 0.58
SREBF1-220ENST00000581707 LRRC8EQ6NSJ5 796 aa18.69■□□□□ 0.58
SREBF1-220ENST00000581707 UBE2R2Q712K3 238 aaPredicted RBP18.69■□□□□ 0.58
SREBF1-220ENST00000581707 MAATS1Q7Z4T9 603 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms