RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 PNMA8BQ9ULN7 279 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 TMCO1Q9UM00 188 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SCML1Q9UN30 329 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 OARD1Q9Y530 152 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 C15orf38-AP3S2A0A0A6YYH1 394 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 TRIM38O00635 465 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 E2F3O00716 465 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 STX16O14662 325 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ANGPT2O15123 496 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SEMA4FO95754 770 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 MLYCDO95822 493 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ATP6V1B1P15313 513 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 DIO3P55073 304 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 GTF2H3Q13889 308 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 LRP8Q14114 963 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ZNF658BQ4V348 819 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PLEKHS1Q5SXH7 462 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 GPRIN3Q6ZVF9 776 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 RD3Q7Z3Z2 195 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ARPINQ7Z6K5 226 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 FUNDC1Q8IVP5 155 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 BMFQ96LC9 184 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 NOL11Q9H8H0 719 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PREBQ9HCU5 417 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SPAG4Q9NPE6 437 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 RIMS3Q9UJD0 308 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 CROTQ9UKG9 612 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 TMA7Q9Y2S6 64 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ST14Q9Y5Y6 855 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ARHGEF33A8MVX0 844 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ACOT8O14734 319 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 KLK8O60259 260 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ESRRBO95718 433 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 CEACAM5P06731 702 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ACP5P13686 325 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 GPX3P22352 226 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 CASP2P42575 452 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 MTAPQ13126 283 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 OGFRL1Q5TC84 451 aaPredicted RBP12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 AMIGO2Q86SJ2 522 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 RHBDF1Q96CC6 855 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 NMD3Q96D46 503 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 TMEM79Q9BSE2 394 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 APOOQ9BUR5 198 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ZCCHC2Q9C0B9 1178 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 USP36Q9P275 1121 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 THEGQ9P2T0 379 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 KCNK6Q9Y257 313 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SMIM31A0A1B0GVY4 71 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 H3BM21 787 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PI15O43692 258 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 VEGFDO43915 354 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SLC7A2P52569 658 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 AGERQ15109 404 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 RETREG3Q86VR2 466 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PCYOX1LQ8NBM8 494 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 OR2T34Q8NGX1 318 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 NUDT8Q8WV74 236 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 LRTOMTQ8WZ04 291 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 BIRC7Q96CA5 298 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 OSGEPL1Q9H4B0 414 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PARVBQ9HBI1 364 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 FGF22Q9HCT0 170 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 WWOXQ9NZC7 414 aa12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PTBP2Q9UKA9 531 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP3-217ENST00000580287 IGHV4-34P06331 123 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 CBSLP0DN79 551 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 UROSP10746 265 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 MAOBP27338 520 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 CBSP35520 551 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PIK3CGP48736 1102 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 CAPRIN1Q14444 709 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 MYBPC3Q14896 1274 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 BCL7AQ4VC05 210 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 UGT2A3Q6UWM9 527 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 AMZ2Q86W34 360 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 C2orf73Q8N5S3 287 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 METTL6Q8TCB7 284 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SNX19Q92543 992 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 TSACCQ96A04 125 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 MPP4Q96JB8 637 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SLC12A9Q9BXP2 914 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PHPT1Q9NRX4 125 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 NUDT4Q9NZJ9 180 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 MRPS17Q9Y2R5 130 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 NCOR1O75376 2440 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ZDBF2Q9HCK1 2354 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 LRRC72A6NJI9 287 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 C19orf67A6NJJ6 358 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 GFYI3L273 518 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 BCAS2O75934 225 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 MATN4O95460 622 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SMIM18P0DKX4 95 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ITPKAP23677 461 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SH3BGRP55822 239 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PRKG2Q13237 762 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 MAP7Q14244 749 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ZNF542PQ5EBM4 170 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ENPP7Q6UWV6 458 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms