RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 HMGCLL1Q8TB92 370 aa17.96■□□□□ 0.47
PRKCA-203ENST00000578063 NSL1Q96IY1 281 aa17.96■□□□□ 0.47
PRKCA-203ENST00000578063 EHD1Q9H4M9 534 aa17.96■□□□□ 0.47
PRKCA-203ENST00000578063 ELOVL6Q9H5J4 265 aa17.96■□□□□ 0.47
PRKCA-203ENST00000578063 KIR3DX1Q9H7L2 352 aa17.96■□□□□ 0.47
PRKCA-203ENST00000578063 ARL8BQ9NVJ2 186 aa17.96■□□□□ 0.47
PRKCA-203ENST00000578063 TLR4O00206 839 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 SLC28A1O00337 649 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 PRAMEF4O60810 478 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 TDGF1P13385 188 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 CTSEP14091 401 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 MAOBP27338 520 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 PKLRP30613 574 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 FNTBP49356 437 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 ZNF33BQ06732 778 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 DOC2AQ14183 400 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 ABRAXAS2Q15018 415 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 TCEA2Q15560 299 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 ZRSR2Q15696 482 aaKnown RBP17.95■□□□□ 0.46
PRKCA-203ENST00000578063 PRAMEF9Q5VWM5 478 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 TSSK4Q6SA08 328 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 SCIMPQ6UWF3 145 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 SUSD1Q6UWL2 747 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 TRIM46Q7Z4K8 759 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 OR52E1Q8NGJ3 308 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 C1orf216Q8TAB5 229 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 SLC5A11Q8WWX8 675 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 NEIL2Q969S2 332 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 WDR34Q96EX3 536 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 TCEAL2Q9H3H9 227 aaPredicted RBP17.95■□□□□ 0.46
PRKCA-203ENST00000578063 APOBEC3BQ9UH17 382 aaKnown RBP17.95■□□□□ 0.46
PRKCA-203ENST00000578063 KLF15Q9UIH9 416 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 ZNF490Q9ULM2 529 aaPredicted RBP17.95■□□□□ 0.46
PRKCA-203ENST00000578063 COPG1Q9Y678 874 aaKnown RBP17.95■□□□□ 0.46
PRKCA-203ENST00000578063 RGS14O43566 566 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 EML2O95834 649 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 T-ENOLP0DO92 83 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 SLC2A4P14672 509 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 RASSF2P50749 326 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 ATP4BP51164 291 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 KLF10Q13118 480 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 SQLEQ14534 574 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 ATP6AP1LQ52LC2 224 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 SLCO4C1Q6ZQN7 724 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 SPATA19Q7Z5L4 167 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 TMPRSS11BQ86T26 416 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 LONP2Q86WA8 852 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 OR2L8Q8NGY9 312 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 SELENOMQ8WWX9 145 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 CXorf40BQ96DE9 158 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 PTCD3Q96EY7 689 aaKnown RBP17.95■□□□□ 0.46
PRKCA-203ENST00000578063 EFCAB11Q9BUY7 163 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 TAAR2Q9P1P5 351 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 TAGLN3Q9UI15 199 aa17.95■□□□□ 0.46
PRKCA-203ENST00000578063 TMEM221A6NGB7 291 aa17.94■□□□□ 0.46
PRKCA-203ENST00000578063 OR5K4A6NMS3 321 aa17.94■□□□□ 0.46
PRKCA-203ENST00000578063 H0YIV9 168 aa17.94■□□□□ 0.46
PRKCA-203ENST00000578063 M0R296 226 aa17.94■□□□□ 0.46
PRKCA-203ENST00000578063 CSF2P04141 144 aa17.94■□□□□ 0.46
PRKCA-203ENST00000578063 ESRRAP11474 423 aaPredicted RBP17.94■□□□□ 0.46
PRKCA-203ENST00000578063 NME1P15531 152 aaKnown RBP17.94■□□□□ 0.46
PRKCA-203ENST00000578063 JUNDP17535 347 aa17.94■□□□□ 0.46
PRKCA-203ENST00000578063 PRDX6P30041 224 aa17.94■□□□□ 0.46
PRKCA-203ENST00000578063 STX1BP61266 288 aa17.94■□□□□ 0.46
PRKCA-203ENST00000578063 NCALDP61601 193 aa17.94■□□□□ 0.46
PRKCA-203ENST00000578063 ZNF542PQ5EBM4 170 aa17.94■□□□□ 0.46
PRKCA-203ENST00000578063 PAGE2BQ5JRK9 111 aa17.94■□□□□ 0.46
PRKCA-203ENST00000578063 FRG2Q64ET8 278 aa17.94■□□□□ 0.46
PRKCA-203ENST00000578063 ATG9BQ674R7 924 aa17.94■□□□□ 0.46
PRKCA-203ENST00000578063 Q6ZSR9 355 aa17.94■□□□□ 0.46
PRKCA-203ENST00000578063 OR2T11Q8NH01 316 aa17.94■□□□□ 0.46
PRKCA-203ENST00000578063 SH3KBP1Q96B97 665 aa17.94■□□□□ 0.46
PRKCA-203ENST00000578063 CMTM5Q96DZ9 223 aa17.94■□□□□ 0.46
PRKCA-203ENST00000578063 MARK4Q96L34 752 aa17.94■□□□□ 0.46
PRKCA-203ENST00000578063 PPP3R2Q96LZ3 170 aa17.94■□□□□ 0.46
PRKCA-203ENST00000578063 FRG2BQ96QU4 278 aa17.94■□□□□ 0.46
PRKCA-203ENST00000578063 G3BP2Q9UN86 482 aaKnown RBP17.94■□□□□ 0.46
PRKCA-203ENST00000578063 SERTM1A2A2V5 107 aa17.93■□□□□ 0.46
PRKCA-203ENST00000578063 PEX11AO75192 247 aa17.93■□□□□ 0.46
PRKCA-203ENST00000578063 CD22P20273 847 aa17.93■□□□□ 0.46
PRKCA-203ENST00000578063 NXPH1P58417 271 aa17.93■□□□□ 0.46
PRKCA-203ENST00000578063 ERVK-8P63133 956 aa17.93■□□□□ 0.46
PRKCA-203ENST00000578063 NAA25Q14CX7 972 aa17.93■□□□□ 0.46
PRKCA-203ENST00000578063 NR6A1Q15406 480 aa17.93■□□□□ 0.46
PRKCA-203ENST00000578063 IMPG1Q17R60 797 aa17.93■□□□□ 0.46
PRKCA-203ENST00000578063 C10orf62Q5T681 223 aaPredicted RBP17.93■□□□□ 0.46
PRKCA-203ENST00000578063 LAYNQ6UX15 382 aa17.93■□□□□ 0.46
PRKCA-203ENST00000578063 TAF8Q7Z7C8 310 aa17.93■□□□□ 0.46
PRKCA-203ENST00000578063 C1orf210Q8IVY1 113 aa17.93■□□□□ 0.46
PRKCA-203ENST00000578063 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.93■□□□□ 0.46
PRKCA-203ENST00000578063 HBEGFQ99075 208 aa17.93■□□□□ 0.46
PRKCA-203ENST00000578063 LRRC61Q9BV99 259 aa17.93■□□□□ 0.46
PRKCA-203ENST00000578063 ZNF624Q9P2J8 865 aaPredicted RBP17.93■□□□□ 0.46
PRKCA-203ENST00000578063 ICKQ9UPZ9 632 aa17.93■□□□□ 0.46
PRKCA-203ENST00000578063 PCDHGA11Q9Y5H2 935 aa17.93■□□□□ 0.46
PRKCA-203ENST00000578063 KIR2DS5A0A0G2JLQ3 304 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 A0A0G2JNG1 304 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 KIR2DS3K7RE56 304 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 LSM1O15116 133 aaKnown RBP17.92■□□□□ 0.46
PRKCA-203ENST00000578063 VILLO15195 856 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms