RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 SETD7Q8WTS6 366 aaKnown RBP10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 UBTD2Q8WUN7 234 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 CXorf40BQ96DE9 158 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 PKP4Q99569 1192 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 RAB11FIP5Q9BXF6 653 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 RAB33BQ9H082 229 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 IQCGQ9H095 443 aaKnown RBP10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 CNOT10Q9H9A5 744 aaKnown RBP10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 OXSMQ9NWU1 459 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 OR6C2Q9NZP2 312 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SLC17A7Q9P2U7 560 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 XPR1Q9UBH6 696 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 RNF112Q9ULX5 631 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 U3KQA8 63 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ZNF839A8K0R7 811 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 E7ENX8 843 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 TAPBPO15533 448 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 TNFSF14O43557 240 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 DLX3O60479 287 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SLC16A8O95907 504 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 BPGMP07738 259 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 CKMT1AP12532 417 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 TAC1P20366 129 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 IMPDH1P20839 514 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 CCND1P24385 295 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 GRK6P43250 576 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SLC6A12P48065 614 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 RAB28P51157 221 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 EPHA4P54764 986 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 HHEXQ03014 270 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 TAP2Q03519 686 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 E2F2Q14209 437 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SETDB1Q15047 1291 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 CCSMST1Q4G0I0 132 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SLC35F3Q8IY50 421 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ARFGAP2Q8N6H7 521 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 OR52E1Q8NGJ3 308 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 OR2L8Q8NGY9 312 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 CFAP61Q8NHU2 1237 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ZNF480Q8WV37 535 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SKA2Q8WVK7 121 aaPredicted RBP10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 PATE1Q8WXA2 126 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 L3HYPDHQ96EM0 354 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 FAM111AQ96PZ2 611 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SGPP1Q9BX95 441 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 TRIM4Q9C037 500 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 EPB41L1Q9H4G0 881 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 KCNK9Q9NPC2 374 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 IMP3Q9NV31 184 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ARL15Q9NXU5 204 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SIRPGQ9P1W8 387 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 STOX2Q9P2F5 926 aaPredicted RBP10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 CPSF2Q9P2I0 782 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 FAM8A1Q9UBU6 413 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 LNPEPQ9UIQ6 1025 aa10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 TNPO3Q9Y5L0 923 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 CFAP20Q9Y6A4 193 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-204ENST00000577664 BOD1L1Q8NFC6 3051 aa10.77□□□□□ -0.68
CDK5RAP3-204ENST00000577664 A8MT66 165 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 UBXN8O00124 270 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 SIGLEC6O43699 453 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 TRIM13O60858 407 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 SMIM24O75264 130 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 NR1D1P20393 614 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 IMPA1P29218 277 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 PKLRP30613 574 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 SHMT2P34897 504 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 SERPINB4P48594 390 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 PNLIPRP1P54315 467 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 TMPRSS3P57727 454 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 HERVK_113P63132 956 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 GALNT1Q10472 559 aaPredicted RBP10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 GPR18Q14330 331 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 PCLAFQ15004 111 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 CLPPQ16740 277 aaPredicted RBP10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 INAVAQ3KP66 663 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 ANKS6Q68DC2 871 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 GATAD2AQ86YP4 633 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 SFTPA2Q8IWL1 248 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 ARMC2Q8NEN0 867 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 RAB3IL1Q8TBN0 382 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 RHBDD1Q8TEB9 315 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 ZBTB9Q96C00 473 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 SCYL1Q96KG9 808 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 APOLD1Q96LR9 279 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 ERVK-6Q9BXR3 956 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 CD244Q9BZW8 370 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 UNKQ9C0B0 810 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 C12orf65Q9H3J6 166 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 STN1Q9H668 368 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 NKIRAS1Q9NYS0 192 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 EPHA6Q9UF33 1036 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 PADI4Q9UM07 663 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 KLK4Q9Y5K2 254 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 ENTPD2Q9Y5L3 495 aa10.77□□□□□ -0.69
CDK5RAP3-204ENST00000577664 TRBV23OR9-2A0A075B6M9 112 aa10.76□□□□□ -0.69
CDK5RAP3-204ENST00000577664 PRAMEF33A0A0G2JMD5 474 aa10.76□□□□□ -0.69
CDK5RAP3-204ENST00000577664 A0A1W2PPV9 198 aa10.76□□□□□ -0.69
CDK5RAP3-204ENST00000577664 B4DGG1 531 aa10.76□□□□□ -0.69
CDK5RAP3-204ENST00000577664 KLF11O14901 512 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms