RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 CMPK1P30085 196 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 KCNC1P48547 511 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 CCT5P48643 541 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 ARL4DP49703 201 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 SEPHS1P49903 392 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 C16orf72Q14CZ0 275 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 PRAMEF13Q5VWM6 474 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 SULT1C3Q6IMI6 304 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 TRIM73Q86UV7 250 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 TRABD2AQ86V40 505 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 KMT5CQ86Y97 462 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 C4orf33Q8N1A6 199 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 AGBL5Q8NDL9 886 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 OR2A1Q8NGT9 310 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 OR56A3Q8NH54 315 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 KLHL6Q8WZ60 621 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 RHBDF1Q96CC6 855 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 PPM1MQ96MI6 270 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 MIPEPQ99797 713 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 MRPL57Q9BQC6 102 aaKnown RBP13.49□□□□□ -0.25
RPAIN-217ENST00000575711 ACAT2Q9BWD1 397 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 PITPNM3Q9BZ71 974 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 MRPL46Q9H2W6 279 aaKnown RBP13.49□□□□□ -0.25
RPAIN-217ENST00000575711 CENPHQ9H3R5 247 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 CNOT10Q9H9A5 744 aaKnown RBP13.49□□□□□ -0.25
RPAIN-217ENST00000575711 INTS7Q9NVH2 962 aaKnown RBP13.49□□□□□ -0.25
RPAIN-217ENST00000575711 XPR1Q9UBH6 696 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 TAC3Q9UHF0 121 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 SPEGQ15772 3267 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 IGHV5-51A0A0C4DH38 117 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 GOLGA6L10A6NI86 522 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 SLC9B1P1A6NJY1 282 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 AGRPO00253 132 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 COPEO14579 308 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 IPO13O94829 963 aaKnown RBP13.48□□□□□ -0.25
RPAIN-217ENST00000575711 GFAPP14136 432 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 ST6GAL1P15907 406 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 LSSP48449 732 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 HSD11B2P80365 405 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 NAA25Q14CX7 972 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 PTCHD3Q3KNS1 767 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 ICE2Q659A1 982 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 SH2D5Q6ZV89 423 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 RAB11FIP2Q7L804 512 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 ERMP1Q7Z2K6 904 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 HDXQ7Z353 690 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 MARCH9Q86YJ5 346 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 SRRM1Q8IYB3 904 aaKnown RBP13.48□□□□□ -0.25
RPAIN-217ENST00000575711 FBXO39Q8N4B4 442 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 OR2L3Q8NG85 312 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 WDR36Q8NI36 951 aaKnown RBP13.48□□□□□ -0.25
RPAIN-217ENST00000575711 PYCR2Q96C36 320 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 TRAPPC9Q96Q05 1148 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 SMC6Q96SB8 1091 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 HAUS8Q9BT25 410 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 SCNM1Q9BWG6 230 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 SGPP1Q9BX95 441 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 MRPS30Q9NP92 439 aaKnown RBP13.48□□□□□ -0.25
RPAIN-217ENST00000575711 SOHLH2Q9NX45 425 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 TMEM216Q9P0N5 145 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 SENP1Q9P0U3 644 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 KLK13Q9UKR3 277 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 TMCO1Q9UM00 188 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 LOXL2Q9Y4K0 774 aa13.48□□□□□ -0.25
RPAIN-217ENST00000575711 CNOT1A5YKK6 2376 aaKnown RBP13.47□□□□□ -0.25
RPAIN-217ENST00000575711 COL27A1Q8IZC6 1860 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-217ENST00000575711 TK2O00142 265 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 SMIM24O75264 130 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 JMJD7P0C870 316 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 MYZAPP0CAP1 466 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 MTHFD2P13995 350 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 PVRP15151 417 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 NELFEP18615 380 aaKnown RBP13.47□□□□□ -0.25
RPAIN-217ENST00000575711 CRHR1P34998 444 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 ABATP80404 500 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 SLC18A2Q05940 514 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 PRDX1Q06830 199 aaKnown RBP13.47□□□□□ -0.25
RPAIN-217ENST00000575711 C3orf38Q5JPI3 329 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 TMTC4Q5T4D3 741 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 KIAA1614Q5VZ46 1190 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 LCTLQ6UWM7 567 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 FAM129CQ86XR2 697 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 FAM20CQ8IXL6 584 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 C19orf47Q8N9M1 422 aaKnown RBP13.47□□□□□ -0.25
RPAIN-217ENST00000575711 PGM2Q96G03 612 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 APOPT1Q96IL0 206 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 SLC41A2Q96JW4 573 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 TMEM79Q9BSE2 394 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 KLHL25Q9H0H3 589 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 STMN4Q9H169 189 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-217ENST00000575711 PDE7BQ9NP56 450 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 CPSF2Q9P2I0 782 aaKnown RBP13.47□□□□□ -0.25
RPAIN-217ENST00000575711 PTBP2Q9UKA9 531 aaKnown RBP13.47□□□□□ -0.25
RPAIN-217ENST00000575711 GRID1Q9ULK0 1009 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 SATB2Q9UPW6 733 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 WASF3Q9UPY6 502 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 NEUROG3Q9Y4Z2 214 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 UNC13CQ8NB66 2214 aa13.47□□□□□ -0.25
RPAIN-217ENST00000575711 EFCAB7A8K855 629 aa13.46□□□□□ -0.25
RPAIN-217ENST00000575711 MAP2K7O14733 419 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms