RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 GBP5Q96PP8 586 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 UBL7Q96S82 380 aaPredicted RBP8.34□□□□□ -1.07
SMG6-216ENST00000575176 RAB11FIP5Q9BXF6 653 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 LRRC4CQ9HCJ2 640 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 RARRES3Q9UL19 164 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 CORO1CQ9ULV4 474 aaPredicted RBP8.34□□□□□ -1.07
SMG6-216ENST00000575176 PDE10AQ9Y233 779 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 PCDHB11Q9Y5F2 797 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 MYO18BQ8IUG5 2567 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 FITM1A5D6W6 292 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 F8W8V4 182 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 NKX2-8O15522 239 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 CPNE3O75131 537 aaKnown RBP8.33□□□□□ -1.08
SMG6-216ENST00000575176 KLF7O75840 302 aaPredicted RBP8.33□□□□□ -1.08
SMG6-216ENST00000575176 ONECUT2O95948 504 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 PRB1P04280 392 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 RPN2P04844 631 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 EFNA3P52797 238 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 FOXL2P58012 376 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 RPS18P62269 152 aaKnown RBP8.33□□□□□ -1.08
SMG6-216ENST00000575176 TBPL1P62380 186 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 MGAT5Q09328 741 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 CDC20Q12834 499 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 PRKAA1Q13131 559 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 DNASE1L3Q13609 305 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 KRT33BQ14525 404 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 ARHGAP19Q14CB8 494 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 MANEAQ5SRI9 462 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 RHBDD2Q6NTF9 364 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 SUSD1Q6UWL2 747 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 C6orf15Q6UXA7 325 aaPredicted RBP8.33□□□□□ -1.08
SMG6-216ENST00000575176 MAATS1Q7Z4T9 603 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 BPHLQ86WA6 291 aaPredicted RBP8.33□□□□□ -1.08
SMG6-216ENST00000575176 RELL1Q8IUW5 271 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 ESX1Q8N693 406 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 STARD8Q92502 1023 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 LINGO1Q96FE5 620 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 TCTN2Q96GX1 697 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 PDLIM5Q96HC4 596 aaKnown RBP8.33□□□□□ -1.08
SMG6-216ENST00000575176 VPS39Q96JC1 886 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 C10orf90Q96M02 699 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 OR4K3Q96R72 315 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 GPR22Q99680 433 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 SGPP1Q9BX95 441 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 FUT8Q9BYC5 575 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 SPRTNQ9H040 489 aaPredicted RBP8.33□□□□□ -1.08
SMG6-216ENST00000575176 RHOJQ9H4E5 214 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 SYTL2Q9HCH5 934 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 PDE7BQ9NP56 450 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 SAYSD1Q9NPB0 183 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 CUEDC1Q9NWM3 386 aaPredicted RBP8.33□□□□□ -1.08
SMG6-216ENST00000575176 SOHLH2Q9NX45 425 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 STOX2Q9P2F5 926 aaPredicted RBP8.33□□□□□ -1.08
SMG6-216ENST00000575176 LNPEPQ9UIQ6 1025 aa8.33□□□□□ -1.08
SMG6-216ENST00000575176 ASH1LQ9NR48 2969 aaKnown RBP8.32□□□□□ -1.08
SMG6-216ENST00000575176 LOC105369274A0A096LPK9 316 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 LOC102723532A0A0G2JNH3 316 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 FAM95CA0A1B0GW59 222 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 CTAGE15A4D2H0 777 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 ISM1B1AKI9 464 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 E5RI56 91 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 MEN1O00255 615 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 P2RX6O15547 441 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 ZNF749O43361 778 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 VPS26AO75436 327 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 FAM155BO75949 473 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 URI1O94763 535 aaPredicted RBP8.32□□□□□ -1.08
SMG6-216ENST00000575176 FKBP9O95302 570 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 ITGB2P05107 769 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 PPM1FP49593 454 aaPredicted RBP8.32□□□□□ -1.08
SMG6-216ENST00000575176 ATP1A2P50993 1020 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 PNLIPRP1P54315 467 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 PLTPP55058 493 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 ITGA1P56199 1179 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 RHDQ02161 417 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 CKAP4Q07065 602 aaKnown RBP8.32□□□□□ -1.08
SMG6-216ENST00000575176 DLG1Q12959 904 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 SP140Q13342 867 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 TBR1Q16650 682 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 PRTGQ2VWP7 1150 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 PTCHD3Q3KNS1 767 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 TTLL9Q3SXZ7 439 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 BROXQ5VW32 411 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 FAM45BPQ6NSW5 357 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 ARMC6Q6NXE6 501 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 C8orf74Q6P047 294 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 MRPL14Q6P1L8 145 aaKnown RBP8.32□□□□□ -1.08
SMG6-216ENST00000575176 FIGLAQ6QHK4 219 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 CAPN12Q6ZSI9 719 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 VN1R4Q7Z5H5 301 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 CTAGE6Q86UF2 777 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 SYTL1Q8IYJ3 562 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 OR4N4Q8N0Y3 316 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 IL22RA1Q8N6P7 574 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 BBOF1Q8ND07 529 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 FAM45AQ8TCE6 357 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 EXTL1Q92935 676 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 WBP1Q96G27 269 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 RBBP8Q99708 897 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 MIPEPQ99797 713 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms