RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 FAM167BQ9BTA0 163 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 SLC6A20Q9NP91 592 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 FBXO6Q9NRD1 293 aaPredicted RBP16.61■□□□□ 0.25
SMG6-212ENST00000573153 SPATA7Q9P0W8 599 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 SNX7Q9UNH6 387 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 MAD1L1Q9Y6D9 718 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 AP1M2Q9Y6Q5 423 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 CCDC88CQ9P219 2028 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 OR2A25A4D2G3 310 aa16.6■□□□□ 0.25
SMG6-212ENST00000573153 FITM1A5D6W6 292 aa16.6■□□□□ 0.25
SMG6-212ENST00000573153 CCDC188H7C350 402 aa16.6■□□□□ 0.25
SMG6-212ENST00000573153 CHRM3P20309 590 aa16.6■□□□□ 0.25
SMG6-212ENST00000573153 CBLBQ13191 982 aa16.6■□□□□ 0.25
SMG6-212ENST00000573153 ATP1A4Q13733 1029 aa16.6■□□□□ 0.25
SMG6-212ENST00000573153 CRYMQ14894 314 aa16.6■□□□□ 0.25
SMG6-212ENST00000573153 KLHL38Q2WGJ6 581 aa16.6■□□□□ 0.25
SMG6-212ENST00000573153 TLDC1Q6P9B6 456 aa16.6■□□□□ 0.25
SMG6-212ENST00000573153 RNF44Q7L0R7 432 aa16.6■□□□□ 0.25
SMG6-212ENST00000573153 FBXO15Q8NCQ5 510 aaPredicted RBP16.6■□□□□ 0.25
SMG6-212ENST00000573153 CD200R1Q8TD46 325 aa16.6■□□□□ 0.25
SMG6-212ENST00000573153 EBNA1BP2Q99848 306 aaKnown RBP16.6■□□□□ 0.25
SMG6-212ENST00000573153 DHRS4Q9BTZ2 278 aa16.6■□□□□ 0.25
SMG6-212ENST00000573153 ING2Q9H160 280 aa16.6■□□□□ 0.25
SMG6-212ENST00000573153 C20orf96Q9NUD7 363 aaPredicted RBP16.6■□□□□ 0.25
SMG6-212ENST00000573153 TSR3Q9UJK0 312 aaKnown RBP16.6■□□□□ 0.25
SMG6-212ENST00000573153 FBXO5Q9UKT4 447 aa16.6■□□□□ 0.25
SMG6-212ENST00000573153 SLC39A10Q9ULF5 831 aa16.6■□□□□ 0.25
SMG6-212ENST00000573153 PCDHGA9Q9Y5G4 932 aaKnown RBP16.6■□□□□ 0.25
SMG6-212ENST00000573153 SETXQ7Z333 2677 aaKnown RBP16.6■□□□□ 0.25
SMG6-212ENST00000573153 HEATR5BQ9P2D3 2071 aa16.59■□□□□ 0.25
SMG6-212ENST00000573153 E5RI56 91 aa16.59■□□□□ 0.25
SMG6-212ENST00000573153 MKRN2OSH3BPM6 223 aa16.59■□□□□ 0.25
SMG6-212ENST00000573153 EIF3FO00303 357 aaPredicted RBP16.59■□□□□ 0.25
SMG6-212ENST00000573153 FOXK1P85037 733 aa16.59■□□□□ 0.25
SMG6-212ENST00000573153 DR1Q01658 176 aa16.59■□□□□ 0.25
SMG6-212ENST00000573153 TTLL9Q3SXZ7 439 aa16.59■□□□□ 0.25
SMG6-212ENST00000573153 FRMPD2BQ6IN97 320 aa16.59■□□□□ 0.25
SMG6-212ENST00000573153 GALNT7Q86SF2 657 aa16.59■□□□□ 0.25
SMG6-212ENST00000573153 MRGPREQ86SM8 312 aa16.59■□□□□ 0.25
SMG6-212ENST00000573153 CNTN4Q8IWV2 1026 aa16.59■□□□□ 0.25
SMG6-212ENST00000573153 GPR135Q8IZ08 494 aa16.59■□□□□ 0.25
SMG6-212ENST00000573153 ARHGEF39Q8N4T4 335 aa16.59■□□□□ 0.25
SMG6-212ENST00000573153 RAB42Q8N4Z0 105 aa16.59■□□□□ 0.25
SMG6-212ENST00000573153 C2CD4AQ8NCU7 369 aaPredicted RBP16.59■□□□□ 0.25
SMG6-212ENST00000573153 DLG3Q92796 817 aa16.59■□□□□ 0.25
SMG6-212ENST00000573153 CAPZA3Q96KX2 299 aa16.59■□□□□ 0.25
SMG6-212ENST00000573153 MIPEPQ99797 713 aa16.59■□□□□ 0.25
SMG6-212ENST00000573153 CLMPQ9H6B4 373 aa16.59■□□□□ 0.25
SMG6-212ENST00000573153 INTS7Q9NVH2 962 aaKnown RBP16.59■□□□□ 0.25
SMG6-212ENST00000573153 SRPK3Q9UPE1 567 aa16.59■□□□□ 0.25
SMG6-212ENST00000573153 NUP210LQ5VU65 1888 aa16.59■□□□□ 0.25
SMG6-212ENST00000573153 LOC105369274A0A096LPK9 316 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 LOC102723532A0A0G2JNH3 316 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 CLEC18AA5D8T8 446 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 TARM1B6A8C7 271 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 MASP2O00187 686 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 HAUS5O94927 633 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 ENO3P13929 434 aaPredicted RBP16.58■□□□□ 0.24
SMG6-212ENST00000573153 SNRPNP63162 240 aaKnown RBP16.58■□□□□ 0.24
SMG6-212ENST00000573153 DHX9Q08211 1270 aaKnown RBP16.58■□□□□ 0.24
SMG6-212ENST00000573153 KLRB1Q12918 225 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 CUL1Q13616 776 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 SLC9A5Q14940 896 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 ARHGAP19Q14CB8 494 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 NKAIN1Q4KMZ8 207 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 HSP90AA5PQ58FG0 334 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 SPANXN3Q5MJ09 141 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 HIBCHQ6NVY1 386 aaPredicted RBP16.58■□□□□ 0.24
SMG6-212ENST00000573153 CLEC18BQ6UXF7 455 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 KIAA0408Q6ZU52 694 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 ASB18Q6ZVZ8 466 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 PPP1R32Q7Z5V6 425 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 KCNMB4Q86W47 210 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 OR4N4Q8N0Y3 316 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 CLEC18CQ8NCF0 446 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 OR9A1PQ8NGU1 263 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 GABPB2Q8TAK5 448 aaPredicted RBP16.58■□□□□ 0.24
SMG6-212ENST00000573153 SKA2Q8WVK7 121 aaPredicted RBP16.58■□□□□ 0.24
SMG6-212ENST00000573153 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.58■□□□□ 0.24
SMG6-212ENST00000573153 ZUFSPQ96AP4 578 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 LRRC39Q96DD0 335 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 PWWP2AQ96N64 755 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 PKP4Q99569 1192 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 SPSB2Q99619 263 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 NUDT9Q9BW91 350 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 CCDC68Q9H2F9 335 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 FAM114A2Q9NRY5 505 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 SLC17A6Q9P2U8 582 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 DHRS7Q9Y394 339 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 ANKRD12Q6UB98 2062 aa16.58■□□□□ 0.24
SMG6-212ENST00000573153 FLNBO75369 2602 aaKnown RBP16.58■□□□□ 0.24
SMG6-212ENST00000573153 GFYI3L273 518 aa16.57■□□□□ 0.24
SMG6-212ENST00000573153 MPC1LP0DKB6 136 aa16.57■□□□□ 0.24
SMG6-212ENST00000573153 PAFAH1B1P43034 410 aa16.57■□□□□ 0.24
SMG6-212ENST00000573153 DCDP81605 110 aaKnown RBP16.57■□□□□ 0.24
SMG6-212ENST00000573153 SRSF1Q07955 248 aaKnown RBP eCLIP16.57■□□□□ 0.24
SMG6-212ENST00000573153 FRG1Q14331 258 aaKnown RBP16.57■□□□□ 0.24
SMG6-212ENST00000573153 SF1Q15637 639 aaKnown RBP16.57■□□□□ 0.24
SMG6-212ENST00000573153 IGFBP7Q16270 282 aa16.57■□□□□ 0.24
SMG6-212ENST00000573153 ZNF425Q6IV72 752 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms