RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 ADRB2P07550 413 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 CXCL8P10145 99 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 ODC1P11926 461 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 TRIM21P19474 475 aaKnown RBP3.94□□□□□ -1.78
NUP88-202ENST00000570937 ELF1P32519 619 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 PPP1R2P41236 205 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 MTHFRP42898 656 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 ACOT2P49753 483 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 NDUFA8P51970 172 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 AP3M2P53677 418 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 SEC61BP60468 96 aaKnown RBP3.94□□□□□ -1.78
NUP88-202ENST00000570937 PTPN14Q15678 1187 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 PSMD5Q16401 504 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 SNRNP35Q16560 246 aaKnown RBP3.94□□□□□ -1.78
NUP88-202ENST00000570937 KNOP1Q1ED39 458 aaKnown RBP3.94□□□□□ -1.78
NUP88-202ENST00000570937 C2orf68Q2NKX9 166 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 GLRA4Q5JXX5 417 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 PAPPA-AS1Q5QFB9 102 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 LIN9Q5TKA1 542 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 SPATA1Q5VX52 437 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 FUT10Q6P4F1 479 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 INO80CQ6PI98 192 aaPredicted RBP3.94□□□□□ -1.78
NUP88-202ENST00000570937 LCTLQ6UWM7 567 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 DSTYKQ6XUX3 929 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 KRBA2Q6ZNG9 492 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 C15orf39Q6ZRI6 1047 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 ZNF771Q7L3S4 317 aaPredicted RBP3.94□□□□□ -1.78
NUP88-202ENST00000570937 TAOK1Q7L7X3 1001 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 TMEM173Q86WV6 379 aaPredicted RBP3.94□□□□□ -1.78
NUP88-202ENST00000570937 TDRPQ86YL5 185 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 RNF168Q8IYW5 571 aaPredicted RBP3.94□□□□□ -1.78
NUP88-202ENST00000570937 THEM5Q8N1Q8 247 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 GPD1LQ8N335 351 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 ESX1Q8N693 406 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 HUS1BQ8NHY5 278 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 NFKBIDQ8NI38 313 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 LNX1Q8TBB1 728 aaPredicted RBP3.94□□□□□ -1.78
NUP88-202ENST00000570937 LRRC15Q8TF66 581 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 SLC41A2Q96JW4 573 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 TIGD1Q96MW7 591 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 KLHL5Q96PQ7 755 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 GSDMAQ96QA5 445 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 FNBP1Q96RU3 617 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 FAM110AQ9BQ89 295 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 KXD1Q9BQD3 176 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 FAM213AQ9BRX8 229 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 DNAI2Q9GZS0 605 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 BLZF1Q9H2G9 400 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 EVA1AQ9H8M9 152 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 MARCH5Q9NX47 278 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 DPP3Q9NY33 737 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 RBAKQ9NYW8 714 aaPredicted RBP3.94□□□□□ -1.78
NUP88-202ENST00000570937 TINAGQ9UJW2 476 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 FBXO9Q9UK97 447 aaPredicted RBP3.94□□□□□ -1.78
NUP88-202ENST00000570937 CPSF3Q9UKF6 684 aaKnown RBP3.94□□□□□ -1.78
NUP88-202ENST00000570937 SARDHQ9UL12 918 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 REV3LO60673 3130 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 PTPRSQ13332 1948 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 GOLGA6L9A6NEM1 432 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 TTC36A6NLP5 189 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 HNRNPCL2B2RXH8 293 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 USP17L23D6RBM5 183 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 ZNF587BE7ETH6 402 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 BMPR1BO00238 502 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 PDXKO00764 312 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 PRRG1O14668 218 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 CLGNO14967 610 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 LINC01565O15544 149 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 MBTPS2O43462 519 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 CALUO43852 315 aaPredicted RBP3.93□□□□□ -1.78
NUP88-202ENST00000570937 FAM189A1O60320 539 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 STX10O60499 249 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 HUS1O60921 280 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 TBX10O75333 385 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 TNNC2P02585 160 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 CYC1P08574 325 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 TNNI1P19237 187 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 ABCD3P28288 659 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 ADSSP30520 456 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 CDAP32320 146 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 OR1D2P34982 312 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 CPOXP36551 454 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 EIF2S3P41091 472 aaKnown RBP3.93□□□□□ -1.78
NUP88-202ENST00000570937 TNFSF9P41273 254 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 PAFAH1B1P43034 410 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 TUBP50607 506 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 CLCN4P51793 760 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 RBP5P82980 135 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 TFAMQ00059 246 aaKnown RBP3.93□□□□□ -1.78
NUP88-202ENST00000570937 YWHAHQ04917 246 aaPredicted RBP3.93□□□□□ -1.78
NUP88-202ENST00000570937 SMARCB1Q12824 385 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 PLD1Q13393 1074 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 KCNC3Q14003 757 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 NAB2Q15742 525 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 ZBTB6Q15916 424 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 TPGS2Q68CL5 300 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 JADE1Q6IE81 842 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 ZNF280DQ6N043 979 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 METTL2BQ6P1Q9 378 aaKnown RBP3.93□□□□□ -1.78
NUP88-202ENST00000570937 CCNI2Q6ZMN8 369 aaPredicted RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms