RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 MSRAQ9UJ68 235 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 TRMT6Q9UJA5 497 aaKnown RBP3.48□□□□□ -1.85
SMG6-208ENST00000570874 TMEM59LQ9UK28 342 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 SARDHQ9UL12 918 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 HCN2Q9UL51 889 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 PADI3Q9ULW8 664 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 PLEKHA6Q9Y2H5 1048 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 PTRH2Q9Y3E5 179 aaKnown RBP3.48□□□□□ -1.85
SMG6-208ENST00000570874 SAMHD1Q9Y3Z3 626 aaKnown RBP3.48□□□□□ -1.85
SMG6-208ENST00000570874 TIMM13Q9Y5L4 95 aaPredicted RBP3.48□□□□□ -1.85
SMG6-208ENST00000570874 RAD54BQ9Y620 910 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 MAU2Q9Y6X3 613 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 SCN8AQ9UQD0 1980 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 KIAA1549LQ6ZVL6 1849 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 ATG2BQ96BY7 2078 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 DOCK9Q9BZ29 2069 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 PIKFYVEQ9Y2I7 2098 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 PLXNB3Q9ULL4 1909 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 A0A0J9YYE9 177 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 BTBD17A6NE02 478 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 ARL5CA6NH57 179 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 ARGFXA6NJG6 315 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 ANXA2P2A6NMY6 339 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 ZNF839A8K0R7 811 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 C12orf71A8MTZ7 269 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 MEI4A8MW99 385 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 CENPBD1B2RD01 187 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 SUPT3HB4E1H0 165 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 E5RJQ4 531 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 F8VP50 259 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 H0Y858 1186 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 H3BQF6 201 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 M0QZ92 97 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 PGRMC1O00264 195 aaKnown RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 CYR61O00622 381 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 WNT9AO14904 365 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 BIRC5O15392 142 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 KCNN4O15554 427 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 ARHGEF9O43307 516 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 AKR7A2O43488 359 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 TNFSF14O43557 240 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 DENRO43583 198 aaKnown RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 DYRK3O43781 588 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 OPHN1O60890 802 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 HSF2BPO75031 334 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 TULP3O75386 442 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 CLEC3AO75596 197 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 SEC14L2O76054 403 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 SEMA3DO95025 777 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 RPP14O95059 124 aaKnown RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 OR2C1O95371 312 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 POMCP01189 267 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 IL1BP01584 269 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 TRBC1P01850 177 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 FGGP02679 453 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 KLKB1P03952 638 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 ITGB2P05107 769 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 ENO1P06733 434 aaKnown RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 SNRPAP09012 282 aaKnown RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 CLEC2LP0C7M8 214 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 STAG3L2P0CL84 134 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 CCDC166P0CW27 439 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 HSMCR30P0CW71 290 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 OR8G3PP0DMU2 310 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 RARAP10276 462 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 GNAT1P11488 350 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 KCNE1P15382 129 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 NCF2P19878 526 aaPredicted RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 TCN1P20061 433 aaPredicted RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 AGAP20933 346 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 CD247P20963 164 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 MMP8P22894 467 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 IL1R2P27930 398 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 ECHS1P30084 290 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 HLA-FP30511 346 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 LRPAP1P30533 357 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 RORAP35398 523 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 MSX2P35548 267 aaPredicted RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 WASP42768 502 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 GPD2P43304 727 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 KCNJ1P48048 391 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 KCNJ5P48544 419 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 CEBPDP49716 269 aaPredicted RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 RAB28P51157 221 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 CACNA2D1P54289 1103 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 MANFP55145 182 aaKnown RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 GPX6P59796 221 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 BPIFB4P59827 614 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 SKP1P63208 163 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 XIAPP98170 497 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 IRF9Q00978 393 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 ROR2Q01974 943 aaKnown RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 IFFO1Q0D2I5 559 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 INCA1Q0VD86 236 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 PDCLQ13371 301 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 DYNC1I2Q13409 638 aaKnown RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 ART3Q13508 389 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 CAPRIN1Q14444 709 aaKnown RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 ZNF273Q14593 569 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 SGCBQ16585 318 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms