RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 CTSBP07858 339 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 PKMP14618 531 aaKnown RBP11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 ALAS2P22557 587 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 FNTAP49354 379 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 ARSFP54793 590 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 IGFBP7Q16270 282 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 CYP1B1Q16678 543 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 CCSMST1Q4G0I0 132 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 NKAIN1Q4KMZ8 207 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 TCTE1Q5JU00 501 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 BRICD5Q6PL45 260 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 FIGLAQ6QHK4 219 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 CAND1Q86VP6 1230 aaKnown RBP11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 MCUQ8NE86 351 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 GRK7Q8WTQ7 553 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 SERPINB12Q96P63 405 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 IP6K3Q96PC2 410 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 SELENOSQ9BQE4 189 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 TRIM56Q9BRZ2 755 aaKnown RBP11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 CCDC68Q9H2F9 335 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 INTS10Q9NVR2 710 aaKnown RBP11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 IL1RAPL1Q9NZN1 696 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 SPATA7Q9P0W8 599 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 ZNF451Q9Y4E5 1061 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 MAD1L1Q9Y6D9 718 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 FAM169AQ9Y6X4 670 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 NBASA2RRP1 2371 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 J3QL48 77 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 PEX12O00623 359 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 ZNF185O15231 689 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 ZSCAN12O43309 604 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 KIF5CO60282 957 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 KLF7O75840 302 aaPredicted RBP11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 USP1O94782 785 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 PSMB5P28074 263 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 GRIA3P42263 894 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 GBX1Q14549 363 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 GRM7Q14831 915 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 NAA25Q14CX7 972 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 TTLL9Q3SXZ7 439 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 ANKRD20A4Q4UJ75 823 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 MSS51Q4VC12 460 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 YOD1Q5VVQ6 348 aaPredicted RBP11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 PAPD7Q5XG87 772 aaKnown RBP11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 FCRL6Q6DN72 434 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 TTLL10Q6ZVT0 673 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 CENPUQ71F23 418 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 ATCAYQ86WG3 371 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 SLC35F6Q8N357 371 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 TTC29Q8NA56 475 aaPredicted RBP11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 OR2L3Q8NG85 312 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 OR2Y1Q8NGV0 311 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 HMGCLL1Q8TB92 370 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 ACTRT1Q8TDG2 376 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 OSBPL9Q96SU4 736 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 MIPEPQ99797 713 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 MLXIPLQ9NP71 852 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 FAM114A2Q9NRY5 505 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 GPR83Q9NYM4 423 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 PCDHGB7Q9Y5F8 929 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 SPENQ96T58 3664 aaKnown RBP11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 LRRK2Q5S007 2527 aa11.86□□□□□ -0.51
CTDNEP1-205ENST00000570828 COL12A1Q99715 3063 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 A6NL46 340 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 ARHGEF33A8MVX0 844 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 TARM1B6A8C7 271 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 CEACAM4O75871 244 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 MATN4O95460 622 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 IGHEP01854 428 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 CATP04040 527 aaKnown RBP11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 PIM1P11309 404 aaPredicted RBP11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 CMPK1P30085 196 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 MLLT10P55197 1068 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 SSPNQ14714 243 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 PPP1R7Q15435 360 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 CYP2A13Q16696 494 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 LONRF1Q17RB8 773 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 KLHL38Q2WGJ6 581 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 ACSBG2Q5FVE4 666 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 MRPL14Q6P1L8 145 aaKnown RBP11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 LMNTD2Q8IXW0 634 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 CLEC1AQ8NC01 280 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 FDCSPQ8NFU4 85 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 OR9A1PQ8NGU1 263 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 COG1Q8WTW3 980 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 ZUFSPQ96AP4 578 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 FKBP10Q96AY3 582 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 PTERQ96BW5 349 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 FER1L6-AS2Q96M78 137 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 GRPEL1Q9HAV7 217 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 FBXO6Q9NRD1 293 aaPredicted RBP11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 CUTCQ9NTM9 273 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 C20orf96Q9NUD7 363 aaPredicted RBP11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 SNX12Q9UMY4 172 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 PLAAQ9Y263 795 aa11.85□□□□□ -0.51
CTDNEP1-205ENST00000570828 ZCWPW2A0A1B0GU75 182 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 TTLL8A6PVC2 850 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 ZNF839A8K0R7 811 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 DSCR3O14972 297 aa11.84□□□□□ -0.51
CTDNEP1-205ENST00000570828 PRICKLE3O43900 615 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms