RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 OTCP00480 354 aa14.91□□□□□ -0.02
HERPUD1-219ENST00000570273 PKNOX1P55347 436 aa14.91□□□□□ -0.02
HERPUD1-219ENST00000570273 GALNT1Q10472 559 aaPredicted RBP14.91□□□□□ -0.02
HERPUD1-219ENST00000570273 TRAF3Q13114 568 aa14.91□□□□□ -0.02
HERPUD1-219ENST00000570273 SH2D4BQ5SQS7 431 aa14.91□□□□□ -0.02
HERPUD1-219ENST00000570273 ZCCHC8Q6NZY4 707 aaKnown RBP14.91□□□□□ -0.02
HERPUD1-219ENST00000570273 LCTLQ6UWM7 567 aa14.91□□□□□ -0.02
HERPUD1-219ENST00000570273 SYVN1Q86TM6 617 aa14.91□□□□□ -0.02
HERPUD1-219ENST00000570273 ZNF781Q8N8C0 355 aa14.91□□□□□ -0.02
HERPUD1-219ENST00000570273 OR4C6Q8NH72 309 aa14.91□□□□□ -0.02
HERPUD1-219ENST00000570273 OR10G6Q8NH81 332 aa14.91□□□□□ -0.02
HERPUD1-219ENST00000570273 OR4K3Q96R72 315 aa14.91□□□□□ -0.02
HERPUD1-219ENST00000570273 PHOX2BQ99453 314 aa14.91□□□□□ -0.02
HERPUD1-219ENST00000570273 MIPEPQ99797 713 aa14.91□□□□□ -0.02
HERPUD1-219ENST00000570273 HAUS8Q9BT25 410 aa14.91□□□□□ -0.02
HERPUD1-219ENST00000570273 ACAT2Q9BWD1 397 aa14.91□□□□□ -0.02
HERPUD1-219ENST00000570273 PCBD2Q9H0N5 130 aa14.91□□□□□ -0.02
HERPUD1-219ENST00000570273 EPN3Q9H201 632 aa14.91□□□□□ -0.02
HERPUD1-219ENST00000570273 TAC3Q9UHF0 121 aa14.91□□□□□ -0.02
HERPUD1-219ENST00000570273 A0A1W2PPV9 198 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 LNP1A1A4G5 178 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 OR6C74A6NCV1 312 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 LILRA5A6NI73 299 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 RHPN2P1A8MT19 583 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 TRIM38O00635 465 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 CLGNO14967 610 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 PPM1DO15297 605 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 CHRM5P08912 532 aaPredicted RBP14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 KITP10721 976 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 EPORP19235 508 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 DRD4P21917 467 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 PSMB5P28074 263 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 PRDX3P30048 256 aaKnown RBP14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 SF3A2Q15428 464 aaKnown RBP14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 MYLK4Q86YV6 388 aaPredicted RBP14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 AFAP1L2Q8N4X5 818 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 DCBLD1Q8N8Z6 715 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 SETD7Q8WTS6 366 aaKnown RBP14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 CDK15Q96Q40 435 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 SLC38A3Q99624 504 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 TBC1D10AQ9BXI6 508 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 ACTR8Q9H981 624 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 UCK1Q9HA47 277 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 TNFRSF12AQ9NP84 129 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 PNPOQ9NVS9 261 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 GPRC5BQ9NZH0 403 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 NCDNQ9UBB6 729 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 FIS1Q9Y3D6 152 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 KCNE2Q9Y6J6 123 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 RNF215Q9Y6U7 377 aa14.9□□□□□ -0.02
HERPUD1-219ENST00000570273 ARHGEF17Q96PE2 2063 aaPredicted RBP14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 A0A1B0GTL3 188 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 ISM1B1AKI9 464 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 TMEM233B4DJY2 109 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 E7EQ34 232 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 BTN3A3O00478 584 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 PCDHGA12O60330 932 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 OR4F21O95013 312 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 CCNDBP1O95273 360 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 ESRRBO95718 433 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 ZNF806P0C7X5 589 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 TROVE2P10155 538 aaKnown RBP eCLIP14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 PEBP1P30086 187 aaKnown RBP14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 PPM1FP49593 454 aaPredicted RBP14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 SH3BP2P78314 561 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 NR0B2Q15466 257 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 MILR1Q7Z6M3 343 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 CPLX4Q7Z7G2 160 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 TMPRSS11BQ86T26 416 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 C17orf64Q86WR6 236 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 OOSP2Q86WS3 158 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 ADGRF3Q8IZF5 1079 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 KIRREL3Q8IZU9 778 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 EID2Q8N6I1 236 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 OR4F6Q8NGB9 312 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 SLC5A11Q8WWX8 675 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 SPHK1Q9NYA1 384 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 ZDHHC2Q9UIJ5 367 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 HAO1Q9UJM8 370 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 SH2B3Q9UQQ2 575 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 PCDHB11Q9Y5F2 797 aa14.89□□□□□ -0.03
HERPUD1-219ENST00000570273 ADAMTS9Q9P2N4 1935 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 PIPSLA2A3N6 862 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 GSAPA4D1B5 854 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 AZIN1O14977 448 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 SIGLEC6O43699 453 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 ZNF883P0CG24 379 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 CDH1P12830 882 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 MYF5P13349 255 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 NPPBP16860 134 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 GNAZP19086 355 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 POLR2CP19387 275 aaPredicted RBP14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 RPL14P50914 215 aaKnown RBP14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 ERVPABLB-1P60509 514 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 IRF8Q02556 426 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 SPEM2Q0P670 501 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 CHIT1Q13231 466 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 KIR2DS3Q14952 304 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms