RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 PNPP00491 289 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 HMGN1P05114 100 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 GNAO1P09471 354 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 ITGA2P17301 1181 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 GPX6P59796 221 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 RALGPS1Q5JS13 557 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 SYCE2Q6PIF2 218 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 RANBP10Q6VN20 620 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 GLRX5Q86SX6 157 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 PLD3Q8IV08 490 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 SCUBE1Q8IWY4 988 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 FAM71AQ8IYT1 594 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 LGI2Q8N0V4 545 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 WDTC1Q8N5D0 677 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 TMEM102Q8N9M5 508 aaPredicted RBP6.5□□□□□ -1.37
SMG1-217ENST00000569764 CCNYQ8ND76 341 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 OR10H4Q8NGA5 316 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 SLC44A1Q8WWI5 657 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 TMEM159Q96B96 161 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 PGAP3Q96FM1 320 aaPredicted RBP6.5□□□□□ -1.37
SMG1-217ENST00000569764 TPPP3Q9BW30 176 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 SF3B5Q9BWJ5 86 aaKnown RBP6.5□□□□□ -1.37
SMG1-217ENST00000569764 CHID1Q9BWS9 393 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 GSDMCQ9BYG8 508 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 RAB33BQ9H082 229 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 ARRDC1-AS1Q9H2J1 176 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 LRRC4CQ9HCJ2 640 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 TMEM140Q9NV12 185 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 NDUFA13Q9P0J0 144 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 ZNF839A8K0R7 811 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 C9J4A7 227 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 M0QZQ0 153 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 O00370 1275 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 PEX12O00623 359 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 HTRA2O43464 458 aaPredicted RBP6.49□□□□□ -1.37
SMG1-217ENST00000569764 TBL1XO60907 577 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 MFN2O95140 757 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 SEMA4FO95754 770 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 LSM8O95777 96 aaKnown RBP6.49□□□□□ -1.37
SMG1-217ENST00000569764 C5AR1P21730 350 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 PTPN3P26045 913 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 HOXC8P31273 242 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 RAD23AP54725 363 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 PPP2R2BQ00005 443 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 ZNF33AQ06730 810 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 SF3A3Q12874 501 aaKnown RBP eCLIP6.49□□□□□ -1.37
SMG1-217ENST00000569764 PDCLQ13371 301 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 NAB1Q13506 487 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 TRIP4Q15650 581 aaPredicted RBP6.49□□□□□ -1.37
SMG1-217ENST00000569764 MARCH8Q5T0T0 291 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 CATSPERDQ86XM0 798 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 MAGEC3Q8TD91 643 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 ALG3Q92685 438 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 AGAP2Q99490 1192 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 ZMAT3Q9HA38 289 aaKnown RBP6.49□□□□□ -1.37
SMG1-217ENST00000569764 PCDH9Q9HC56 1237 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 ENOPH1Q9UHY7 261 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 CDC14AQ9UNH5 594 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 C19orf67A6NJJ6 358 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 FGF10O15520 208 aaPredicted RBP6.49□□□□□ -1.37
SMG1-217ENST00000569764 DYRK3O43781 588 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 RAMP2O60895 175 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 EIF2S1P05198 315 aaKnown RBP6.49□□□□□ -1.37
SMG1-217ENST00000569764 CCNYL3P0C7X3 344 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 BRAFP15056 766 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 KRT15P19012 456 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 HOXA6P31267 233 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 NBL1P41271 181 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 GPR3P46089 330 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 ZNF41P51814 821 aaPredicted RBP6.49□□□□□ -1.37
SMG1-217ENST00000569764 S100A12P80511 92 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 CBFBQ13951 182 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 FAM102AQ5T9C2 384 aaPredicted RBP6.49□□□□□ -1.37
SMG1-217ENST00000569764 KLHL17Q6TDP4 642 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 KCTD9Q7L273 389 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 S100A7AQ86SG5 101 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 NT5DC3Q86UY8 548 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 UBL4BQ8N7F7 174 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 PLD5Q8N7P1 536 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 OR2T34Q8NGX1 318 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 GATA6Q92908 595 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 LINGO1Q96FE5 620 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 APOPT1Q96IL0 206 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 ZNF514Q96K75 400 aaPredicted RBP6.49□□□□□ -1.37
SMG1-217ENST00000569764 TMEM246Q9BRR3 403 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 ADGRE3Q9BY15 652 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 DUSP16Q9BY84 665 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 MRPL37Q9BZE1 423 aaKnown RBP6.49□□□□□ -1.37
SMG1-217ENST00000569764 TRIM15Q9C019 465 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 OPN3Q9H1Y3 402 aaPredicted RBP6.49□□□□□ -1.37
SMG1-217ENST00000569764 VCX2Q9H322 139 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 ZNF358Q9NW07 568 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 FAM32AQ9Y421 112 aaKnown RBP6.49□□□□□ -1.37
SMG1-217ENST00000569764 A0A088AWK7 358 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 MAP2K7O14733 419 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 METTL18O95568 372 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 CEACAM1P13688 526 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 EPORP19235 508 aa6.49□□□□□ -1.37
SMG1-217ENST00000569764 ZNF10P21506 573 aaPredicted RBP6.49□□□□□ -1.37
SMG1-217ENST00000569764 TNFRSF8P28908 595 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms