RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 MIPEPQ99797 713 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 NDC1Q9BTX1 674 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 MRM3Q9HC36 420 aaKnown RBP13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 SLC6A20Q9NP91 592 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 HOMER3Q9NSC5 361 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 TXLNGQ9NUQ3 528 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 NDOR1Q9UHB4 597 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 GNPTGQ9UJJ9 305 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 SOX13Q9UN79 622 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 NTNG1Q9Y2I2 539 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 KLK4Q9Y5K2 254 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 HS3ST3B1Q9Y662 390 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 ZGRF1Q86YA3 2104 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 IGKV1-8A0A0C4DH67 115 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 A0A1B0GX78 115 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 FITM1A5D6W6 292 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 USP27XA6NNY8 438 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 ARHGEF33A8MVX0 844 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 DSCR3O14972 297 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 KIF5CO60282 957 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 VPS4BO75351 444 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 NDUFS3O75489 264 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 MATN4O95460 622 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 ALAS2P22557 587 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 FMO4P31512 558 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 MAGEA6P43360 314 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 NPY2RP49146 381 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 VPS41P49754 854 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 TMED2Q15363 201 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 SF1Q15637 639 aaKnown RBP13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 ACSBG2Q5FVE4 666 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 OVCH1Q7RTY7 1134 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 SHISA5Q8N114 240 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 EFCAB3Q8N7B9 438 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 GIMAP7Q8NHV1 300 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 PTERQ96BW5 349 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 SNRNP40Q96DI7 357 aaKnown RBP13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 C10orf90Q96M02 699 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 CUTCQ9NTM9 273 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 IRAK4Q9NWZ3 460 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 BFARQ9NZS9 450 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 GPN3Q9UHW5 284 aaPredicted RBP13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 FBXL4Q9UKA2 621 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 VPS4AQ9UN37 437 aa13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.25□□□□□ -0.29
GTF3C1-211ENST00000569653 VSTM2BA6NLU5 285 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 ERGP11308 486 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 SOX8P57073 446 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 VSX2P58304 361 aaPredicted RBP13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 Q0VFX4 171 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 CYP2A13Q16696 494 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 EIF2S3LQ2VIR3 472 aaKnown RBP13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 KIAA0930Q6ICG6 404 aaPredicted RBP13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 ZNF549Q6P9A3 640 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 KIRREL2Q6UWL6 708 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 IGFL3Q6UXB1 125 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 C4orf22Q6V702 233 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 RNF44Q7L0R7 432 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 GSTA5Q7RTV2 222 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 OTOAQ7RTW8 1153 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 CUZD1Q86UP6 607 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 LRRC6Q86X45 466 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 FKBP10Q96AY3 582 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 RAD51AP1Q96B01 352 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 MS4A14Q96JA4 679 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 PBKQ96KB5 322 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 PANX3Q96QZ0 392 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 NAP1L3Q99457 506 aaPredicted RBP13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 C17orf62Q9BQA9 187 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 SELENOSQ9BQE4 189 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 TSSK1BQ9BXA7 367 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 SLC26A1Q9H2B4 701 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 SOX17Q9H6I2 414 aaPredicted RBP13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 ASF1BQ9NVP2 202 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 TRMT1Q9NXH9 659 aaKnown RBP13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 C5AR2Q9P296 337 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 ANAPC5Q9UJX4 755 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 SLC39A10Q9ULF5 831 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 CRYL1Q9Y2S2 319 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 NEU2Q9Y3R4 380 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 MAU2Q9Y6X3 613 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 CPAMD8Q8IZJ3 1885 aa13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 DIDO1Q9BTC0 2240 aaKnown RBP13.24□□□□□ -0.29
GTF3C1-211ENST00000569653 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.23□□□□□ -0.29
GTF3C1-211ENST00000569653 A0A0J9YVX5 310 aa13.23□□□□□ -0.29
GTF3C1-211ENST00000569653 OR2A25A4D2G3 310 aa13.23□□□□□ -0.29
GTF3C1-211ENST00000569653 F8W8V4 182 aa13.23□□□□□ -0.29
GTF3C1-211ENST00000569653 AGPSO00116 658 aa13.23□□□□□ -0.29
GTF3C1-211ENST00000569653 KDM1AO60341 852 aa13.23□□□□□ -0.29
GTF3C1-211ENST00000569653 RPN2P04844 631 aa13.23□□□□□ -0.29
GTF3C1-211ENST00000569653 MMP11P24347 488 aa13.23□□□□□ -0.29
GTF3C1-211ENST00000569653 CLCN7P51798 805 aa13.23□□□□□ -0.29
GTF3C1-211ENST00000569653 EFNA3P52797 238 aa13.23□□□□□ -0.29
GTF3C1-211ENST00000569653 WASHC2DQ5SRD0 308 aa13.23□□□□□ -0.29
GTF3C1-211ENST00000569653 FBXO42Q6P3S6 717 aa13.23□□□□□ -0.29
GTF3C1-211ENST00000569653 SUSD1Q6UWL2 747 aa13.23□□□□□ -0.29
GTF3C1-211ENST00000569653 SLC35F6Q8N357 371 aa13.23□□□□□ -0.29
GTF3C1-211ENST00000569653 ARHGEF39Q8N4T4 335 aa13.23□□□□□ -0.29
GTF3C1-211ENST00000569653 CISD2Q8N5K1 135 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms