RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 OR2A1Q8NGT9 310 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 MCOLN3Q8TDD5 553 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 CLIP3Q96DZ5 547 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 WBP1Q96G27 269 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 SLC7A5P2Q9GIP4 190 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 ACTR5Q9H9F9 607 aaPredicted RBP13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 IL17BQ9UHF5 180 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 KLHL20Q9Y2M5 609 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 AP1M2Q9Y6Q5 423 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 ATMQ13315 3056 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 TCRBV9S1A1TA0A576 114 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 ESYT3A0FGR9 886 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 C21orf140B9A014 251 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 E7ENX8 843 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 H3BMH7 237 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 MEN1O00255 615 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 TERTO14746 1132 aaKnown RBP13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 ATXN7O15265 892 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 SLC16A5O15375 505 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 ZNF749O43361 778 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 OR2B3O76000 313 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 SLC16A8O95907 504 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 ITGB2P05107 769 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 F8A1P23610 371 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 PSMB5P28074 263 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 CMPK1P30085 196 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 RPA3P35244 121 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 GRIA3P42263 894 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 CYP4F2P78329 520 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 GUCY2DQ02846 1103 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 TAP2Q03519 686 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 GPS2Q13227 327 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 SP140Q13342 867 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 DNASE1L3Q13609 305 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 NAA25Q14CX7 972 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 CRTC2Q53ET0 693 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 GLE1Q53GS7 698 aaKnown RBP13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 SOWAHCQ53LP3 525 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 TAF1BQ53T94 588 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 TLDC1Q6P9B6 456 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 FAM199XQ6PEV8 388 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 SUSD1Q6UWL2 747 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 ZNF517Q6ZMY9 492 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 SYTL1Q8IYJ3 562 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 DSELQ8IZU8 1212 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 CT55Q8WUE5 264 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 ZNF480Q8WV37 535 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 STARD8Q92502 1023 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 TTC9Q92623 222 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 MR1Q95460 341 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 LINGO1Q96FE5 620 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 CCDC138Q96M89 665 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 OLFM1Q99784 485 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 MIPEPQ99797 713 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 GPR87Q9BY21 358 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 SPRTNQ9H040 489 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 RHOJQ9H4E5 214 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 AKIRIN1Q9H9L7 192 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 PARVBQ9HBI1 364 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 LRRC4CQ9HCJ2 640 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 SMYD2Q9NRG4 433 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 EURLQ9NYK6 297 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 PCDHGA6Q9Y5G7 932 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 KLK4Q9Y5K2 254 aa13.28□□□□□ -0.28
HERPUD1-218ENST00000569569 FAM95CA0A1B0GW59 222 aa13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 NKX2-8O15522 239 aa13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 KATNA1O75449 491 aa13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 TSPAN12O95859 305 aa13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 HIST1H2AGP0C0S8 130 aaPredicted RBP13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 HIST1H2ADP20671 130 aa13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 SAT1P21673 171 aa13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 RORAP35398 523 aa13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 GPX6P59796 221 aa13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 PRDX1Q06830 199 aaKnown RBP13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 TSTA3Q13630 321 aaPredicted RBP13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 MCATQ8IVS2 390 aaKnown RBP13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 NOA1Q8NC60 698 aaKnown RBP13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 PPFIBP2Q8ND30 876 aa13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 DLG3Q92796 817 aa13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 PDLIM5Q96HC4 596 aaKnown RBP13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 HIST1H2AHQ96KK5 128 aa13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 CATSPER2Q96P56 530 aa13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 BBC3Q96PG8 261 aaPredicted RBP13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 HIST1H2AJQ99878 128 aa13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 DPH2Q9BQC3 489 aaPredicted RBP13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 MCMBPQ9BTE3 642 aa13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 H2AFJQ9BTM1 129 aa13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 ACAT2Q9BWD1 397 aa13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 FAM129AQ9BZQ8 928 aa13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 FAM117AQ9C073 453 aa13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 MRPS30Q9NP92 439 aaKnown RBP13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 ZDHHC18Q9NUE0 388 aa13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 PCMTD2Q9NV79 361 aa13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 TXNDC16Q9P2K2 825 aa13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 ADAMTS6Q9UKP5 1117 aa13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 PDE10AQ9Y233 779 aa13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 MRPS18BQ9Y676 258 aaKnown RBP13.27□□□□□ -0.29
HERPUD1-218ENST00000569569 FAM159BA6NKW6 160 aa13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 COL6A6A6NMZ7 2263 aa13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 CXorf49A8MYA2 514 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms