RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 EQTNQ9NQ60 294 aa2.69□□□□□ -1.98
UBR1-209ENST00000569243 SPHK2Q9NRA0 654 aa2.69□□□□□ -1.98
UBR1-209ENST00000569243 P4HTMQ9NXG6 502 aa2.69□□□□□ -1.98
UBR1-209ENST00000569243 DPP3Q9NY33 737 aa2.69□□□□□ -1.98
UBR1-209ENST00000569243 IL17BQ9UHF5 180 aa2.69□□□□□ -1.98
UBR1-209ENST00000569243 ZNF215Q9UL58 517 aaPredicted RBP2.69□□□□□ -1.98
UBR1-209ENST00000569243 ANGPTL3Q9Y5C1 460 aa2.69□□□□□ -1.98
UBR1-209ENST00000569243 GLOD5A6NK44 160 aa2.68□□□□□ -1.98
UBR1-209ENST00000569243 C2orf81A6NN90 581 aa2.68□□□□□ -1.98
UBR1-209ENST00000569243 ERAL1O75616 437 aaKnown RBP2.68□□□□□ -1.98
UBR1-209ENST00000569243 TOMM70O94826 608 aa2.68□□□□□ -1.98
UBR1-209ENST00000569243 HSPA8P11142 646 aaKnown RBP2.68□□□□□ -1.98
UBR1-209ENST00000569243 GABRA5P31644 462 aa2.68□□□□□ -1.98
UBR1-209ENST00000569243 TSFMP43897 325 aaKnown RBP2.68□□□□□ -1.98
UBR1-209ENST00000569243 ZFP36L2P47974 494 aaKnown RBP2.68□□□□□ -1.98
UBR1-209ENST00000569243 TPD52P55327 224 aaPredicted RBP2.68□□□□□ -1.98
UBR1-209ENST00000569243 EFTUD2Q15029 972 aaKnown RBP eCLIP2.68□□□□□ -1.98
UBR1-209ENST00000569243 SYT14P1Q58G82 188 aa2.68□□□□□ -1.98
UBR1-209ENST00000569243 FAM182AQ5T1J6 154 aa2.68□□□□□ -1.98
UBR1-209ENST00000569243 SEL1L3Q68CR1 1132 aa2.68□□□□□ -1.98
UBR1-209ENST00000569243 FRRS1Q6ZNA5 592 aa2.68□□□□□ -1.98
UBR1-209ENST00000569243 G2E3Q7L622 706 aa2.68□□□□□ -1.98
UBR1-209ENST00000569243 CFAP206Q8IYR0 622 aa2.68□□□□□ -1.98
UBR1-209ENST00000569243 FBXO39Q8N4B4 442 aa2.68□□□□□ -1.98
UBR1-209ENST00000569243 TDRD5Q8NAT2 981 aaKnown RBP2.68□□□□□ -1.98
UBR1-209ENST00000569243 OR6S1Q8NH40 331 aa2.68□□□□□ -1.98
UBR1-209ENST00000569243 OR1L3Q8NH93 324 aa2.68□□□□□ -1.98
UBR1-209ENST00000569243 VANGL1Q8TAA9 524 aaPredicted RBP2.68□□□□□ -1.98
UBR1-209ENST00000569243 SSMEM1Q8WWF3 244 aa2.68□□□□□ -1.98
UBR1-209ENST00000569243 PRPF31Q8WWY3 499 aaKnown RBP2.68□□□□□ -1.98
UBR1-209ENST00000569243 SLAMF9Q96A28 289 aa2.68□□□□□ -1.98
UBR1-209ENST00000569243 CDRT15Q96T59 188 aa2.68□□□□□ -1.98
UBR1-209ENST00000569243 PANK2Q9BZ23 570 aa2.68□□□□□ -1.98
UBR1-209ENST00000569243 FAM49AQ9H0Q0 323 aaPredicted RBP2.68□□□□□ -1.98
UBR1-209ENST00000569243 CHST11Q9NPF2 352 aa2.68□□□□□ -1.98
UBR1-209ENST00000569243 TBC1D22BQ9NU19 505 aa2.68□□□□□ -1.98
UBR1-209ENST00000569243 DAPK2Q9UIK4 370 aa2.68□□□□□ -1.98
UBR1-209ENST00000569243 VPS28Q9UK41 221 aa2.68□□□□□ -1.98
UBR1-209ENST00000569243 COL4A4P53420 1690 aaPredicted RBP2.68□□□□□ -1.98
UBR1-209ENST00000569243 TRIOBPQ9H2D6 2365 aa2.68□□□□□ -1.98
UBR1-209ENST00000569243 FSD2A1L4K1 749 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 ENO4A6NNW6 628 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 H0YAE9 185 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 EPHB6O15197 1021 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 CEACAM4O75871 244 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 ZWINTO95229 277 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 SEC24AO95486 1093 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 ALOX12P18054 663 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 SAT1P21673 171 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 CDH3P22223 829 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 GCH1P30793 250 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 MNDAP41218 407 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 STAT2P52630 851 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 LMOD3Q0VAK6 560 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 CHAF1BQ13112 559 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 HERC3Q15034 1050 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 CA9Q16790 459 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 CBWD6Q4V339 395 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 CBWD3Q5JTY5 395 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 SLC35D3Q5M8T2 416 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 RNASEH2BQ5TBB1 312 aaKnown RBP2.67□□□□□ -1.98
UBR1-209ENST00000569243 FAM205BPQ63HN1 556 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 BTN2A1Q7KYR7 527 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 PHC2Q8IXK0 858 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 GPRC5AQ8NFJ5 357 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 OR11H4Q8NGC9 324 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 OR13C3Q8NGS6 347 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 CENPTQ96BT3 561 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 SPACA9Q96E40 222 aaPredicted RBP2.67□□□□□ -1.98
UBR1-209ENST00000569243 C1orf147Q96MC9 270 aaPredicted RBP2.67□□□□□ -1.98
UBR1-209ENST00000569243 PSMB7Q99436 277 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 OLFM1Q99784 485 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 NKX3-1Q99801 234 aaPredicted RBP2.67□□□□□ -1.98
UBR1-209ENST00000569243 PUS3Q9BZE2 481 aaKnown RBP2.67□□□□□ -1.98
UBR1-209ENST00000569243 THAP2Q9H0W7 228 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 GHITMQ9H3K2 345 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 GNB4Q9HAV0 340 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 BLOC1S4Q9NUP1 217 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 STUB1Q9UNE7 303 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 CSNK1G3Q9Y6M4 447 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 ARID2Q68CP9 1835 aa2.67□□□□□ -1.98
UBR1-209ENST00000569243 ACOD1A6NK06 481 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 ENTPD3O75355 529 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 HAPLN1P10915 354 aaPredicted RBP2.66□□□□□ -1.98
UBR1-209ENST00000569243 SLC2A2P11168 524 aaPredicted RBP2.66□□□□□ -1.98
UBR1-209ENST00000569243 PAX3P23760 479 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 EIF5P55010 431 aaKnown RBP2.66□□□□□ -1.98
UBR1-209ENST00000569243 KLC1Q07866 573 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 TAF10Q12962 218 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 WTAPQ15007 396 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 MEA1Q16626 185 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 UGT3A2Q3SY77 523 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 LCN1P1Q5VSP4 162 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 TMEM211Q6ICI0 200 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 PRR27Q6MZM9 219 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 C11orf63Q6NUN7 778 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 NOTUMQ6P988 496 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 FAM198BQ6UWH4 519 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 TMEM207Q6UWW9 146 aa2.66□□□□□ -1.98
UBR1-209ENST00000569243 SLC47A2Q86VL8 602 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms