RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 BLOC1S3Q6QNY0 202 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 XKR5Q6UX68 686 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 ZNF852Q6ZMS4 543 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 USP30Q70CQ3 517 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 TRIM46Q7Z4K8 759 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 LIX1Q8N485 282 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 CDC26Q8NHZ8 85 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 PROKR1Q8TCW9 393 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 FERD3LQ96RJ6 166 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 CDX2Q99626 313 aaPredicted RBP6.85□□□□□ -1.31
SMG1-215ENST00000568239 TRIM8Q9BZR9 551 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 POLMQ9NP87 494 aaPredicted RBP6.85□□□□□ -1.31
SMG1-215ENST00000568239 CCDC177Q9NQR7 707 aaPredicted RBP6.85□□□□□ -1.31
SMG1-215ENST00000568239 C1orf109Q9NX04 203 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 PRPF19Q9UMS4 504 aaKnown RBP6.85□□□□□ -1.31
SMG1-215ENST00000568239 CYP8B1Q9UNU6 501 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 WDR37Q9Y2I8 494 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 CCL27Q9Y4X3 112 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 OR52A4PA6NMU1 304 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 FPGTO14772 594 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 PSMG1O95456 288 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 LMNAP02545 664 aaKnown RBP6.84□□□□□ -1.31
SMG1-215ENST00000568239 ME2P23368 584 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 DGKQP52824 942 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 PNLIPRP1P54315 467 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 TAP2Q03519 686 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 RPA4Q13156 261 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 MAD2L1Q13257 205 aaPredicted RBP6.84□□□□□ -1.31
SMG1-215ENST00000568239 CEACAM7Q14002 265 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 FLOT2Q14254 428 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 SMAD2Q15796 467 aaKnown RBP6.84□□□□□ -1.31
SMG1-215ENST00000568239 LIPJQ5W064 366 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 ADNP2Q6IQ32 1131 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 PGM2L1Q6PCE3 622 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 DCUN1D3Q8IWE4 304 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 CHCHD4Q8N4Q1 142 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 L3MBTL4Q8NA19 623 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 OR56A3Q8NH54 315 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 DNAJB14Q8TBM8 379 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 PYDC1Q8WXC3 89 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 GFM2Q969S9 779 aaKnown RBP6.84□□□□□ -1.31
SMG1-215ENST00000568239 APOLD1Q96LR9 279 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 UHRF1Q96T88 793 aaPredicted RBP6.84□□□□□ -1.31
SMG1-215ENST00000568239 EBPLQ9BY08 206 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 DPY30Q9C005 99 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 BRINP2Q9C0B6 783 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 FGF22Q9HCT0 170 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 SPAG4Q9NPE6 437 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 ITM2CQ9NQX7 267 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 PCDHGA7Q9Y5G6 932 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 TDRD6O60522 2096 aaKnown RBP6.84□□□□□ -1.31
SMG1-215ENST00000568239 A0A1W2PP18 115 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 SHISA7A6NL88 538 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 BBIP1A8MTZ0 92 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 LRATO95237 230 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 SEMA4FO95754 770 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 RPN2P04844 631 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 GLULP15104 373 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 NPPBP16860 134 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 XRCC1P18887 633 aaPredicted RBP6.84□□□□□ -1.31
SMG1-215ENST00000568239 KELP23276 732 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 HTR1BP28222 390 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 IL12AP29459 219 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 SLC7A2P52569 658 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 RCAN2Q14206 197 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 SF1Q15637 639 aaKnown RBP6.84□□□□□ -1.31
SMG1-215ENST00000568239 MLF2Q15773 248 aaPredicted RBP6.84□□□□□ -1.31
SMG1-215ENST00000568239 GGTA1PQ4G0N0 100 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 PDCD4Q53EL6 469 aaKnown RBP6.84□□□□□ -1.31
SMG1-215ENST00000568239 UNC5DQ6UXZ4 953 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 RASGRP3Q8IV61 690 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 OR5K2Q8NHB8 316 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 RLN3Q8WXF3 142 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 SNX19Q92543 992 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 TSACCQ96A04 125 aaPredicted RBP6.84□□□□□ -1.31
SMG1-215ENST00000568239 PDXPQ96GD0 296 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 APIPQ96GX9 242 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 TSSK3Q96PN8 268 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 ZBTB18Q99592 522 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 TRIT1Q9H3H1 467 aaKnown RBP6.84□□□□□ -1.31
SMG1-215ENST00000568239 LMAN1LQ9HAT1 526 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 ZIM2Q9NZV7 527 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 MAP10Q9P2G4 905 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 FBXL21Q9UKT6 434 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 ACSL5Q9ULC5 683 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 SH2B3Q9UQQ2 575 aa6.84□□□□□ -1.31
SMG1-215ENST00000568239 ARHGEF17Q96PE2 2063 aaPredicted RBP6.84□□□□□ -1.32
SMG1-215ENST00000568239 MYO15AQ9UKN7 3530 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 KCNE1BA0A087WTH5 132 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 A0A1W2PPC1 479 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 GPR89AB7ZAQ6 455 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 MAN2B1O00754 1011 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 RSL1D1O76021 490 aaKnown RBP6.84□□□□□ -1.32
SMG1-215ENST00000568239 GPR89BP0CG08 455 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 IDSP22304 550 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 HNRNPA2B1P22626 353 aaKnown RBP6.84□□□□□ -1.32
SMG1-215ENST00000568239 HNF4AP41235 474 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 PXNP49023 591 aaPredicted RBP6.84□□□□□ -1.32
SMG1-215ENST00000568239 GRIK2Q13002 908 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 PYCR3Q53H96 274 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms