RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	ZNF295-AS1	Q8N0V1	137 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	METTL27	Q8N6F8	245 aa	Predicted RBP	10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	LMNTD1	Q8N9Z9	388 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	TTC29	Q8NA56	475 aa	Predicted RBP	10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	OR2L8	Q8NGY9	312 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	KRT35	Q92764	455 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	SELENOS	Q9BQE4	189 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	ZNF304	Q9HCX3	659 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	ABHD10	Q9NUJ1	306 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	ABI3	Q9P2A4	366 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	C3orf18	Q9UK00	162 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	EFR3B	Q9Y2G0	817 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	MAU2	Q9Y6X3	613 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	SCN3A	Q9NY46	2000 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	IGLV3-12	A0A075B6K2	115 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	HYKK	A2RU49	373 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	MROH6	A6NGR9	719 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	TARM1	B6A8C7	271 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	UNC5C	O95185	931 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	BMP10	O95393	424 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	CRYAB	P02511	175 aa	Known RBP	10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	SERPINA7	P05543	415 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	ZGLP1	P0C6A0	271 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	OR56A5	P0C7T3	313 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	COX6A1	P12074	109 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	MSN	P26038	577 aa	Known RBP	10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	VSX2	P58304	361 aa	Predicted RBP	10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	OCA2	Q04671	838 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	POU6F1	Q14863	301 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	SF1	Q15637	639 aa	Known RBP	10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	SYTL3	Q4VX76	610 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	VWA2	Q5GFL6	755 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	PRMT9	Q6P2P2	845 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	DARS2	Q6PI48	645 aa	Known RBP	10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	XKRX	Q6PP77	449 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	NDUFAF7	Q7L592	441 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	VRK3	Q8IV63	474 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	DCUN1D3	Q8IWE4	304 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	PRSS58	Q8IYP2	241 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	C2orf73	Q8N5S3	287 aa	Predicted RBP	10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	DNAJB8	Q8NHS0	232 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	BRIX1	Q8TDN6	353 aa	Known RBP	10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	ZUFSP	Q96AP4	578 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	MIEF2	Q96C03	454 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	C8orf44	Q96CB5	159 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	LRRC45	Q96CN5	670 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	IL17F	Q96PD4	163 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	RNF32	Q9H0A6	362 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	PTGFRN	Q9P2B2	879 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	IMPACT	Q9P2X3	320 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	ZNF282	Q9UDV7	671 aa	Predicted RBP	10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	SEC14L3	Q9UDX4	400 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	ITGB1BP2	Q9UKP3	347 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	KLK4	Q9Y5K2	254 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	ADGRG4	Q8IZF6	3080 aa		10.86	□□□□□ -0.67
TCF4-238	ENST00000568169	NSG1	A0A0A6YYJ2	146 aa		10.85	□□□□□ -0.67
TCF4-238	ENST00000568169	SYCE3	A1L190	88 aa		10.85	□□□□□ -0.67
TCF4-238	ENST00000568169	CCDC162P	A2VCL2	907 aa		10.85	□□□□□ -0.67
TCF4-238	ENST00000568169	C2orf72	A6NCS6	295 aa		10.85	□□□□□ -0.67
TCF4-238	ENST00000568169	OR51F1	A6NGY5	319 aa		10.85	□□□□□ -0.67
TCF4-238	ENST00000568169		F8W8V4	182 aa		10.85	□□□□□ -0.67
TCF4-238	ENST00000568169	PJA2	O43164	708 aa		10.85	□□□□□ -0.67
TCF4-238	ENST00000568169	OR1I1	O60431	355 aa		10.85	□□□□□ -0.67
TCF4-238	ENST00000568169	GPC4	O75487	556 aa		10.85	□□□□□ -0.67
TCF4-238	ENST00000568169	RPN2	P04844	631 aa		10.85	□□□□□ -0.67
TCF4-238	ENST00000568169	TPM3	P06753	285 aa		10.85	□□□□□ -0.67
TCF4-238	ENST00000568169	CCR7	P32248	378 aa		10.85	□□□□□ -0.67
TCF4-238	ENST00000568169	CSE1L	P55060	971 aa	Known RBP	10.85	□□□□□ -0.67
TCF4-238	ENST00000568169	TESK1	Q15569	626 aa		10.85	□□□□□ -0.67
TCF4-238	ENST00000568169	PARP6	Q2NL67	630 aa		10.85	□□□□□ -0.67
TCF4-238	ENST00000568169	C11orf63	Q6NUN7	778 aa		10.85	□□□□□ -0.67
TCF4-238	ENST00000568169	UNC5D	Q6UXZ4	953 aa		10.85	□□□□□ -0.67
TCF4-238	ENST00000568169	RIPOR1	Q6ZS17	1223 aa		10.85	□□□□□ -0.67
TCF4-238	ENST00000568169	LAPTM4B	Q86VI4	370 aa		10.85	□□□□□ -0.67
TCF4-238	ENST00000568169	TAX1BP1	Q86VP1	789 aa		10.85	□□□□□ -0.67
TCF4-238	ENST00000568169	SIRT6	Q8N6T7	355 aa		10.85	□□□□□ -0.67
TCF4-238	ENST00000568169	HS3ST6	Q96QI5	342 aa		10.85	□□□□□ -0.67
TCF4-238	ENST00000568169	FAM118B	Q9BPY3	351 aa		10.85	□□□□□ -0.67
TCF4-238	ENST00000568169	CIDEB	Q9UHD4	219 aa		10.85	□□□□□ -0.67
TCF4-238	ENST00000568169	HCFC1	P51610	2035 aa		10.85	□□□□□ -0.67
TCF4-238	ENST00000568169	LOC105369274	A0A096LPK9	316 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	IGHV1-45	A0A0A0MS14	117 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	LOC102723532	A0A0G2JNH3	316 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	MACROD2	A1Z1Q3	448 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	RASGRF2	O14827	1237 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	MFAP3L	O75121	409 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	SLCO2B1	O94956	709 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	RASAL1	O95294	804 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	WDPCP	O95876	746 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	AGA	P20933	346 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	CTNNA2	P26232	953 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	SSTR2	P30874	369 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	PTPN7	P35236	360 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	ADORA2A-AS1	P86434	159 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	HSPA14	Q0VDF9	509 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	MUM1	Q2TAK8	710 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	KRTAP21-3	Q3LHN1	58 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	FRMPD2B	Q6IN97	320 aa		10.84	□□□□□ -0.67

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