RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 KLHL38Q2WGJ6 581 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 ZC3H12BQ5HYM0 836 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 WASHC2DQ5SRD0 308 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 PAPD7Q5XG87 772 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 JMJD6Q6NYC1 403 aaPredicted RBP11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 COX15Q7KZN9 410 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 CILP2Q8IUL8 1156 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 OR4N4Q8N0Y3 316 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 AGGF1Q8N302 714 aaeCLIP11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 SLC35F6Q8N357 371 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 RASGEF1CQ8N431 466 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 RAB42Q8N4Z0 105 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 RBMXL3Q8N7X1 1067 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 PPFIBP2Q8ND30 876 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 OR2L3Q8NG85 312 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 OR2A1Q8NGT9 310 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 OR2Y1Q8NGV0 311 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 GIMAP7Q8NHV1 300 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 DLG3Q92796 817 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 PTERQ96BW5 349 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 PBKQ96KB5 322 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 SERPINB12Q96P63 405 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 C17orf62Q9BQA9 187 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 MESP1Q9BRJ9 268 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 SOX17Q9H6I2 414 aaPredicted RBP11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 CTSFQ9UBX1 484 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 ZC3H7BQ9UGR2 993 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 G3BP2Q9UN86 482 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 JRKLQ9Y4A0 524 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 MAD1L1Q9Y6D9 718 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 SPTBN1Q01082 2364 aaKnown RBP11.71□□□□□ -0.54
GTF3C1-208ENST00000567843 SDR42E2A6NKP2 422 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 FFAR3O14843 346 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 DSCR3O14972 297 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 PFDN6O15212 129 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 GPR42O15529 346 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 DPM1O60762 260 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 VPS4BO75351 444 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 BANF1O75531 89 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 SYF2O95926 243 aaKnown RBP11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 ESR1P03372 595 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 OGNP20774 298 aaKnown RBP11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 CCNFP41002 786 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 MAGEA6P43360 314 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 GCGRP47871 477 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 CD97P48960 835 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 ARSFP54793 590 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 GRM7Q14831 915 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 CYP2A13Q16696 494 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 DCAF10Q5QP82 559 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 RNF187Q5TA31 235 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 SLC6A19Q695T7 634 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 ZNF549Q6P9A3 640 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 OVCH1Q7RTY7 1134 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 GALNT16Q8N428 558 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 TTC29Q8NA56 475 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 Q8NA96 180 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 CLEC1AQ8NC01 280 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 OR9A1PQ8NGU1 263 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 FER1L6-AS2Q96M78 137 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 TCF12Q99081 682 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 PKP4Q99569 1192 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 DPH7Q9BTV6 452 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 RAB11FIP5Q9BXF6 653 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 SYNPO2LQ9H987 977 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 ZBTB20Q9HC78 741 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 SLC6A20Q9NP91 592 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 SLAMF7Q9NQ25 335 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 C20orf96Q9NUD7 363 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 TRMT1Q9NXH9 659 aaKnown RBP11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 ANKMY1Q9P2S6 941 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 CDC23Q9UJX2 597 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 VPS4AQ9UN37 437 aa11.7□□□□□ -0.54
GTF3C1-208ENST00000567843 ZCWPW2A0A1B0GU75 182 aa11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 FAM237BA0A1B0GVD1 139 aa11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 HYKKA2RU49 373 aa11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 H3BMM5 538 aa11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 PGRMC1O00264 195 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 USP1O94782 785 aa11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 SORBS2O94875 1100 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 MATN4O95460 622 aa11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 STATHP02808 62 aa11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 RPA3P35244 121 aaPredicted RBP11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 CLCN7P51798 805 aa11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 MPP1Q00013 466 aa11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 GBX1Q14549 363 aa11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 INPP5JQ15735 1006 aaPredicted RBP11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 NKG7Q16617 165 aa11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 PLEKHN1Q494U1 663 aaPredicted RBP11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 TCTE1Q5JU00 501 aa11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 FBXO42Q6P3S6 717 aa11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 REXO1L1PQ8IX06 675 aa11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 PARP9Q8IXQ6 854 aa11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 MAGEC3Q8TD91 643 aa11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 COL26A1Q96A83 441 aa11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 ZUFSPQ96AP4 578 aa11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 C19orf60Q96EN9 201 aa11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 OSBPL9Q96SU4 736 aa11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 SPSB2Q99619 263 aa11.69□□□□□ -0.54
GTF3C1-208ENST00000567843 YIPF2Q9BWQ6 316 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms