RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	PPID	Q08752	370 aa	Known RBP	13.09	□□□□□ -0.31
SMG1-213	ENST00000567737	TUBA3C	Q13748	450 aa		13.09	□□□□□ -0.31
SMG1-213	ENST00000567737	PIGH	Q14442	188 aa	Predicted RBP	13.09	□□□□□ -0.31
SMG1-213	ENST00000567737	KIR2DS3	Q14952	304 aa		13.09	□□□□□ -0.31
SMG1-213	ENST00000567737	TUBA3E	Q6PEY2	450 aa		13.09	□□□□□ -0.31
SMG1-213	ENST00000567737	PAMR1	Q6UXH9	720 aa		13.09	□□□□□ -0.31
SMG1-213	ENST00000567737	GLT6D1	Q7Z4J2	308 aa		13.09	□□□□□ -0.31
SMG1-213	ENST00000567737	CCDC71	Q8IV32	467 aa	Predicted RBP	13.09	□□□□□ -0.31
SMG1-213	ENST00000567737	BEST3	Q8N1M1	668 aa		13.09	□□□□□ -0.31
SMG1-213	ENST00000567737	CPSF7	Q8N684	471 aa	Known RBP	13.09	□□□□□ -0.31
SMG1-213	ENST00000567737	MDS2	Q8NDY4	140 aa		13.09	□□□□□ -0.31
SMG1-213	ENST00000567737	SPATA22	Q8NHS9	363 aa		13.09	□□□□□ -0.31
SMG1-213	ENST00000567737	TADA1	Q96BN2	335 aa		13.09	□□□□□ -0.31
SMG1-213	ENST00000567737	SCMH1	Q96GD3	660 aa		13.09	□□□□□ -0.31
SMG1-213	ENST00000567737	PWWP2A	Q96N64	755 aa		13.09	□□□□□ -0.31
SMG1-213	ENST00000567737	SIGLEC12	Q96PQ1	595 aa		13.09	□□□□□ -0.31
SMG1-213	ENST00000567737	HACD3	Q9P035	362 aa		13.09	□□□□□ -0.31
SMG1-213	ENST00000567737	L3MBTL1	Q9Y468	752 aa		13.09	□□□□□ -0.31
SMG1-213	ENST00000567737	AKAP6	Q13023	2319 aa		13.08	□□□□□ -0.31
SMG1-213	ENST00000567737	VPS13C	Q709C8	3753 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	USP27X	A6NNY8	438 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737		A8MUI8	341 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	HEXB	P07686	556 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	FER	P16591	822 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	SSR1	P43307	286 aa	Known RBP	13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	RPA4	Q13156	261 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	KEAP1	Q14145	624 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	DPYSL3	Q14195	570 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	NOMO1	Q15155	1222 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	OR1C1	Q15619	314 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	ACER2	Q5QJU3	275 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	FAM182A	Q5T1J6	154 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	PRMT9	Q6P2P2	845 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	GALNTL5	Q7Z4T8	443 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	FGD2	Q7Z6J4	655 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	CDC20B	Q86Y33	519 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	DTWD1	Q8N5C7	304 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	OR5AR1	Q8NGP9	310 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	FAM71B	Q8TC56	605 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	BLOC1S5	Q8TDH9	187 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	ZNF354B	Q96LW1	612 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	SELENOS	Q9BQE4	189 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	UTP23	Q9BRU9	249 aa	Known RBP	13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	TUBB6	Q9BUF5	446 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	ZNF700	Q9H0M5	742 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	ASB8	Q9H765	288 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	VPS37B	Q9H9H4	285 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	INTS7	Q9NVH2	962 aa	Known RBP	13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	ANKRD10	Q9NXR5	420 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	POLG2	Q9UHN1	485 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	GNPTG	Q9UJJ9	305 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	ASF1A	Q9Y294	204 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	KLHL20	Q9Y2M5	609 aa		13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	TDRKH	Q9Y2W6	561 aa	Known RBP	13.08	□□□□□ -0.32
SMG1-213	ENST00000567737	IGLV3-12	A0A075B6K2	115 aa		13.07	□□□□□ -0.32
SMG1-213	ENST00000567737	STX7	O15400	261 aa	Known RBP	13.07	□□□□□ -0.32
SMG1-213	ENST00000567737	KDM1A	O60341	852 aa		13.07	□□□□□ -0.32
SMG1-213	ENST00000567737	FTL	P02792	175 aa	Predicted RBP	13.07	□□□□□ -0.32
SMG1-213	ENST00000567737	FBL	P22087	321 aa	Known RBP	13.07	□□□□□ -0.32
SMG1-213	ENST00000567737	AP1B1	Q10567	949 aa		13.07	□□□□□ -0.32
SMG1-213	ENST00000567737	SLC10A2	Q12908	348 aa	Predicted RBP	13.07	□□□□□ -0.32
SMG1-213	ENST00000567737	SPINK14	Q6IE38	97 aa		13.07	□□□□□ -0.32
SMG1-213	ENST00000567737	CHSY3	Q70JA7	882 aa		13.07	□□□□□ -0.32
SMG1-213	ENST00000567737	TBC1D21	Q8IYX1	336 aa		13.07	□□□□□ -0.32
SMG1-213	ENST00000567737	HORMAD2	Q8N7B1	307 aa		13.07	□□□□□ -0.32
SMG1-213	ENST00000567737	KCTD6	Q8NC69	237 aa		13.07	□□□□□ -0.32
SMG1-213	ENST00000567737	TRIM11	Q96F44	468 aa		13.07	□□□□□ -0.32
SMG1-213	ENST00000567737	ZNF670	Q9BS34	389 aa		13.07	□□□□□ -0.32
SMG1-213	ENST00000567737	YIPF2	Q9BWQ6	316 aa		13.07	□□□□□ -0.32
SMG1-213	ENST00000567737	TP63	Q9H3D4	680 aa	Predicted RBP	13.07	□□□□□ -0.32
SMG1-213	ENST00000567737	NEUROD4	Q9HD90	331 aa		13.07	□□□□□ -0.32
SMG1-213	ENST00000567737	UBP1	Q9NZI7	540 aa		13.07	□□□□□ -0.32
SMG1-213	ENST00000567737	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	13.07	□□□□□ -0.32
SMG1-213	ENST00000567737	NBEAL1	Q6ZS30	2694 aa		13.06	□□□□□ -0.32
SMG1-213	ENST00000567737	GTF3C1	Q12789	2109 aa		13.06	□□□□□ -0.32
SMG1-213	ENST00000567737	LOC102723996	A0A087X1L8	192 aa		13.06	□□□□□ -0.32
SMG1-213	ENST00000567737		A0A1B0GTH9	108 aa		13.06	□□□□□ -0.32
SMG1-213	ENST00000567737	HYKK	A2RU49	373 aa		13.06	□□□□□ -0.32
SMG1-213	ENST00000567737	FITM1	A5D6W6	292 aa		13.06	□□□□□ -0.32
SMG1-213	ENST00000567737	SRP72	O76094	671 aa	Known RBP	13.06	□□□□□ -0.32
SMG1-213	ENST00000567737	SUN1	O94901	812 aa		13.06	□□□□□ -0.32
SMG1-213	ENST00000567737	ATP1B2	P14415	290 aa	Predicted RBP	13.06	□□□□□ -0.32
SMG1-213	ENST00000567737	PEBP1	P30086	187 aa	Known RBP	13.06	□□□□□ -0.32
SMG1-213	ENST00000567737	PTGER1	P34995	402 aa		13.06	□□□□□ -0.32
SMG1-213	ENST00000567737	CD96	P40200	585 aa		13.06	□□□□□ -0.32
SMG1-213	ENST00000567737	GRIA3	P42263	894 aa		13.06	□□□□□ -0.32
SMG1-213	ENST00000567737	HADH	Q16836	314 aa	Known RBP	13.06	□□□□□ -0.32
SMG1-213	ENST00000567737	FCRLB	Q6BAA4	426 aa		13.06	□□□□□ -0.32
SMG1-213	ENST00000567737	ARSK	Q6UWY0	536 aa		13.06	□□□□□ -0.32
SMG1-213	ENST00000567737	SLC25A41	Q8N5S1	370 aa		13.06	□□□□□ -0.32
SMG1-213	ENST00000567737	HEXDC	Q8WVB3	486 aa		13.06	□□□□□ -0.32
SMG1-213	ENST00000567737	SEC16B	Q96JE7	1060 aa		13.06	□□□□□ -0.32
SMG1-213	ENST00000567737	ENAM	Q9NRM1	1142 aa		13.06	□□□□□ -0.32
SMG1-213	ENST00000567737	C14orf105	Q9NVL8	296 aa		13.06	□□□□□ -0.32
SMG1-213	ENST00000567737	CRLS1	Q9UJA2	301 aa		13.06	□□□□□ -0.32
SMG1-213	ENST00000567737	ADAM21	Q9UKJ8	722 aa		13.06	□□□□□ -0.32
SMG1-213	ENST00000567737	RNF212B	A8MTL3	300 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	INAFM1	C9JVW0	142 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	DDX3X	O00571	662 aa	Known RBP eCLIP	13.05	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms