RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 FIG4Q92562 907 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 FGF13Q92913 245 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 SMARCD2Q92925 531 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 C12orf43Q96C57 262 aaKnown RBP17.25■□□□□ 0.35
CMTM3-214ENST00000567572 SLC47A1Q96FL8 570 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 MAGED4Q96JG8 741 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 OR52E6Q96RD3 313 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 OSBPL10Q9BXB5 764 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 KAT8Q9H7Z6 458 aaKnown RBP17.25■□□□□ 0.35
CMTM3-214ENST00000567572 HPS4Q9NQG7 708 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 IFT80Q9P2H3 777 aaPredicted RBP17.25■□□□□ 0.35
CMTM3-214ENST00000567572 ADGRE2Q9UHX3 823 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 INVSQ9Y283 1065 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 PABPN1LA6NDY0 278 aaKnown RBP17.25■□□□□ 0.35
CMTM3-214ENST00000567572 C16orf96A6NNT2 1141 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 G3V2T6 193 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 KPNA5O15131 536 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 RECQL5O94762 991 aaPredicted RBP17.25■□□□□ 0.35
CMTM3-214ENST00000567572 C1SP09871 688 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 BCKDHAP12694 445 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 FSHRP23945 695 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 NNMTP40261 264 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 GDF5P43026 501 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 RPIAP49247 311 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 GABARAPL2P60520 117 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 HMGCS1Q01581 520 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 BIRC2Q13490 618 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 ARHGEF7Q14155 803 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 RFX4Q33E94 735 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 TBPL2Q6SJ96 375 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 NEK10Q6ZWH5 1172 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 THAP5Q7Z6K1 395 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 C8orf59Q8N0T1 100 aaPredicted RBP17.25■□□□□ 0.35
CMTM3-214ENST00000567572 L3MBTL4Q8NA19 623 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 OR10A6Q8NH74 314 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 HDAC2Q92769 488 aaKnown RBP17.25■□□□□ 0.35
CMTM3-214ENST00000567572 TBC1D20Q96BZ9 403 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 CMTM7Q96FZ5 175 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 ITCHQ96J02 903 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 CPPED1Q9BRF8 314 aaPredicted RBP17.25■□□□□ 0.35
CMTM3-214ENST00000567572 PIF1Q9H611 641 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 POLR1BQ9H9Y6 1135 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 PARVBQ9HBI1 364 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 DCAF13Q9NV06 445 aaKnown RBP17.25■□□□□ 0.35
CMTM3-214ENST00000567572 DZANK1Q9NVP4 752 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 ARL15Q9NXU5 204 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 SLC25A37Q9NYZ2 338 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 ZNHIT2Q9UHR6 403 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 TSR3Q9UJK0 312 aaKnown RBP17.25■□□□□ 0.35
CMTM3-214ENST00000567572 BLOC1S6Q9UL45 172 aa17.25■□□□□ 0.35
CMTM3-214ENST00000567572 PRRC2BQ5JSZ5 2229 aaKnown RBP17.25■□□□□ 0.35
CMTM3-214ENST00000567572 KIF26AQ9ULI4 1882 aaPredicted RBP17.24■□□□□ 0.35
CMTM3-214ENST00000567572 H0Y858 1186 aa17.24■□□□□ 0.35
CMTM3-214ENST00000567572 WNT9AO14904 365 aa17.24■□□□□ 0.35
CMTM3-214ENST00000567572 NOL3O60936 208 aaKnown RBP17.24■□□□□ 0.35
CMTM3-214ENST00000567572 LEFTY1O75610 366 aa17.24■□□□□ 0.35
CMTM3-214ENST00000567572 SLC6A12P48065 614 aa17.24■□□□□ 0.35
CMTM3-214ENST00000567572 AP1S2P56377 157 aa17.24■□□□□ 0.35
CMTM3-214ENST00000567572 PPP2R2BQ00005 443 aa17.24■□□□□ 0.35
CMTM3-214ENST00000567572 RAB39AQ14964 217 aa17.24■□□□□ 0.35
CMTM3-214ENST00000567572 DPY19L1Q2PZI1 675 aa17.24■□□□□ 0.35
CMTM3-214ENST00000567572 GAB4Q2WGN9 574 aa17.24■□□□□ 0.35
CMTM3-214ENST00000567572 PLEKHS1Q5SXH7 462 aa17.24■□□□□ 0.35
CMTM3-214ENST00000567572 OTUD3Q5T2D3 398 aaPredicted RBP17.24■□□□□ 0.35
CMTM3-214ENST00000567572 BROXQ5VW32 411 aa17.24■□□□□ 0.35
CMTM3-214ENST00000567572 SUSD1Q6UWL2 747 aa17.24■□□□□ 0.35
CMTM3-214ENST00000567572 STK32CQ86UX6 486 aa17.24■□□□□ 0.35
CMTM3-214ENST00000567572 EID3Q8N140 333 aa17.24■□□□□ 0.35
CMTM3-214ENST00000567572 ZCCHC7Q8N3Z6 543 aaKnown RBP17.24■□□□□ 0.35
CMTM3-214ENST00000567572 FAM162AQ96A26 154 aa17.24■□□□□ 0.35
CMTM3-214ENST00000567572 NRBF2Q96F24 287 aa17.24■□□□□ 0.35
CMTM3-214ENST00000567572 ACPTQ9BZG2 426 aa17.24■□□□□ 0.35
CMTM3-214ENST00000567572 PAIP1Q9H074 479 aaKnown RBP17.24■□□□□ 0.35
CMTM3-214ENST00000567572 ING2Q9H160 280 aa17.24■□□□□ 0.35
CMTM3-214ENST00000567572 NKX2-4Q9H2Z4 354 aa17.24■□□□□ 0.35
CMTM3-214ENST00000567572 LIMD1Q9UGP4 676 aa17.24■□□□□ 0.35
CMTM3-214ENST00000567572 GMEB1Q9Y692 573 aa17.24■□□□□ 0.35
CMTM3-214ENST00000567572 V9GYQ6 96 aa17.24■□□□□ 0.35
CMTM3-214ENST00000567572 PLXNB3Q9ULL4 1909 aa17.24■□□□□ 0.35
CMTM3-214ENST00000567572 KCNE1BA0A087WTH5 132 aa17.23■□□□□ 0.35
CMTM3-214ENST00000567572 EPOPA6NHQ4 379 aa17.23■□□□□ 0.35
CMTM3-214ENST00000567572 PRMT3O60678 531 aa17.23■□□□□ 0.35
CMTM3-214ENST00000567572 DNAJB5O75953 348 aa17.23■□□□□ 0.35
CMTM3-214ENST00000567572 CLIC3O95833 236 aa17.23■□□□□ 0.35
CMTM3-214ENST00000567572 CST1P01037 141 aa17.23■□□□□ 0.35
CMTM3-214ENST00000567572 MT-ND1P03886 318 aa17.23■□□□□ 0.35
CMTM3-214ENST00000567572 CTSLP07711 333 aa17.23■□□□□ 0.35
CMTM3-214ENST00000567572 HIST1H2AGP0C0S8 130 aaPredicted RBP17.23■□□□□ 0.35
CMTM3-214ENST00000567572 HIST1H2ADP20671 130 aa17.23■□□□□ 0.35
CMTM3-214ENST00000567572 AOAHP28039 575 aa17.23■□□□□ 0.35
CMTM3-214ENST00000567572 ABHD18Q0P651 414 aa17.23■□□□□ 0.35
CMTM3-214ENST00000567572 TOP3AQ13472 1001 aaPredicted RBP17.23■□□□□ 0.35
CMTM3-214ENST00000567572 IL18R1Q13478 541 aa17.23■□□□□ 0.35
CMTM3-214ENST00000567572 ZC3H12BQ5HYM0 836 aaKnown RBP17.23■□□□□ 0.35
CMTM3-214ENST00000567572 LRRC73Q5JTD7 316 aa17.23■□□□□ 0.35
CMTM3-214ENST00000567572 KCTD8Q6ZWB6 473 aa17.23■□□□□ 0.35
CMTM3-214ENST00000567572 ZNF555Q8NEP9 628 aa17.23■□□□□ 0.35
CMTM3-214ENST00000567572 B4GALNT2Q8NHY0 566 aa17.23■□□□□ 0.35
CMTM3-214ENST00000567572 FAM81AQ8TBF8 368 aa17.23■□□□□ 0.35
CMTM3-214ENST00000567572 EZH1Q92800 747 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms