RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 TIGD6Q17RP2 521 aa15.27■□□□□ 0.04
COMMD4-215ENST00000566843 PAN2Q504Q3 1202 aaKnown RBP15.27■□□□□ 0.04
COMMD4-215ENST00000566843 PLEKHH3Q7Z736 793 aa15.27■□□□□ 0.04
COMMD4-215ENST00000566843 SYTL1Q8IYJ3 562 aa15.27■□□□□ 0.04
COMMD4-215ENST00000566843 RGL4Q8IZJ4 473 aa15.27■□□□□ 0.04
COMMD4-215ENST00000566843 CELF2-AS1Q8N7Q2 184 aa15.27■□□□□ 0.04
COMMD4-215ENST00000566843 RAD9AQ99638 391 aa15.27■□□□□ 0.04
COMMD4-215ENST00000566843 COPS4Q9BT78 406 aa15.27■□□□□ 0.04
COMMD4-215ENST00000566843 ZFP14Q9HCL3 533 aa15.27■□□□□ 0.04
COMMD4-215ENST00000566843 TRPS1Q9UHF7 1281 aa15.27■□□□□ 0.04
COMMD4-215ENST00000566843 ARIH1Q9Y4X5 557 aaPredicted RBP15.27■□□□□ 0.04
COMMD4-215ENST00000566843 GREB1Q4ZG55 1949 aa15.27■□□□□ 0.03
COMMD4-215ENST00000566843 ZW10O43264 779 aa15.27■□□□□ 0.03
COMMD4-215ENST00000566843 DPM1O60762 260 aa15.27■□□□□ 0.03
COMMD4-215ENST00000566843 ZNF682O95780 498 aa15.27■□□□□ 0.03
COMMD4-215ENST00000566843 RPLP0P05388 317 aaKnown RBP15.27■□□□□ 0.03
COMMD4-215ENST00000566843 FABP3P05413 133 aa15.27■□□□□ 0.03
COMMD4-215ENST00000566843 BCKDHAP12694 445 aa15.27■□□□□ 0.03
COMMD4-215ENST00000566843 OR1E1P30953 314 aa15.27■□□□□ 0.03
COMMD4-215ENST00000566843 GRK5P34947 590 aa15.27■□□□□ 0.03
COMMD4-215ENST00000566843 HSPA7P48741 367 aa15.27■□□□□ 0.03
COMMD4-215ENST00000566843 CLDN8P56748 225 aa15.27■□□□□ 0.03
COMMD4-215ENST00000566843 DDR2Q16832 855 aa15.27■□□□□ 0.03
COMMD4-215ENST00000566843 ZNF544Q6NX49 715 aa15.27■□□□□ 0.03
COMMD4-215ENST00000566843 TAS2R42Q7RTR8 314 aa15.27■□□□□ 0.03
COMMD4-215ENST00000566843 MRPL10Q7Z7H8 261 aaKnown RBP15.27■□□□□ 0.03
COMMD4-215ENST00000566843 RMDN1Q96DB5 314 aa15.27■□□□□ 0.03
COMMD4-215ENST00000566843 HRASLS5Q96KN8 279 aa15.27■□□□□ 0.03
COMMD4-215ENST00000566843 INPP5KQ9BT40 448 aa15.27■□□□□ 0.03
COMMD4-215ENST00000566843 GABARAPL3Q9BY60 117 aa15.27■□□□□ 0.03
COMMD4-215ENST00000566843 MIR1-1HGQ9H1L0 117 aa15.27■□□□□ 0.03
COMMD4-215ENST00000566843 FARSBQ9NSD9 589 aaKnown RBP15.27■□□□□ 0.03
COMMD4-215ENST00000566843 ZNF221Q9UK13 617 aa15.27■□□□□ 0.03
COMMD4-215ENST00000566843 ST3GAL5Q9UNP4 418 aa15.27■□□□□ 0.03
COMMD4-215ENST00000566843 PCDHGA6Q9Y5G7 932 aa15.27■□□□□ 0.03
COMMD4-215ENST00000566843 MICAL3Q7RTP6 2002 aa15.27■□□□□ 0.03
COMMD4-215ENST00000566843 CHD5Q8TDI0 1954 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 C17orf102A2RUQ5 167 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 MANBAO00462 879 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 FFAR3O14843 346 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 GPR42O15529 346 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 ARHGEF15O94989 841 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 HOXC8P31273 242 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 CACNB2Q08289 660 aaPredicted RBP15.26■□□□□ 0.03
COMMD4-215ENST00000566843 C17orf99Q6UX52 265 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 SERPINA11Q86U17 422 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 UBQLNLQ8IYU4 475 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 NLGN4XQ8N0W4 816 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 USP7Q93009 1102 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 MYDGFQ969H8 173 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 RPRD1AQ96P16 312 aaPredicted RBP15.26■□□□□ 0.03
COMMD4-215ENST00000566843 MYOCQ99972 504 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 SARS2Q9NP81 518 aaKnown RBP15.26■□□□□ 0.03
COMMD4-215ENST00000566843 SIRT5Q9NXA8 310 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 ZNF490Q9ULM2 529 aaPredicted RBP15.26■□□□□ 0.03
COMMD4-215ENST00000566843 PNMA8CA0A1B0GUJ8 204 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 A6NL46 340 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 LOC110117498-PIK3R3F6TDL0 507 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 H7C0S8 307 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 ULK1O75385 1050 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 APOA1P02647 267 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 CDK1P06493 297 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 MAGP20916 626 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 HOXD9P28356 352 aaPredicted RBP15.26■□□□□ 0.03
COMMD4-215ENST00000566843 S100A3P33764 101 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 RGRP47804 291 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 PIK3CGP48736 1102 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 VLDLRP98155 873 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 EFEMP1Q12805 493 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 GRB14Q14449 540 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 FBXO43Q4G163 708 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 ZRANB3Q5FWF4 1079 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 RNF19BQ6ZMZ0 732 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 SPATC1Q76KD6 591 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 CCDC190Q86UF4 302 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 HORMAD1Q86X24 394 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 SCN4BQ8IWT1 228 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 PIK3R3Q92569 461 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 MYEOVQ96EZ4 313 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 SMIM14Q96QK8 99 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 PSKH2Q96QS6 385 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 SDHCQ99643 169 aaPredicted RBP15.26■□□□□ 0.03
COMMD4-215ENST00000566843 NTMT1Q9BV86 223 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 NSUN3Q9H649 340 aaKnown RBP15.26■□□□□ 0.03
COMMD4-215ENST00000566843 KIF17Q9P2E2 1029 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 RPS6KA6Q9UK32 745 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.26■□□□□ 0.03
COMMD4-215ENST00000566843 CAB39Q9Y376 341 aaPredicted RBP15.26■□□□□ 0.03
COMMD4-215ENST00000566843 SAMHD1Q9Y3Z3 626 aaKnown RBP15.26■□□□□ 0.03
COMMD4-215ENST00000566843 OARD1Q9Y530 152 aa15.26■□□□□ 0.03
COMMD4-215ENST00000566843 IQCF5A8MTL0 148 aa15.25■□□□□ 0.03
COMMD4-215ENST00000566843 hCG_2039718K7EN88 272 aa15.25■□□□□ 0.03
COMMD4-215ENST00000566843 GUCY1B2O75343 617 aa15.25■□□□□ 0.03
COMMD4-215ENST00000566843 PARNO95453 639 aaKnown RBP15.25■□□□□ 0.03
COMMD4-215ENST00000566843 TYMPP19971 482 aa15.25■□□□□ 0.03
COMMD4-215ENST00000566843 CR2P20023 1033 aa15.25■□□□□ 0.03
COMMD4-215ENST00000566843 SLC19A1P41440 591 aa15.25■□□□□ 0.03
COMMD4-215ENST00000566843 CDKN2CP42773 168 aa15.25■□□□□ 0.03
COMMD4-215ENST00000566843 HTR3AP46098 478 aa15.25■□□□□ 0.03
COMMD4-215ENST00000566843 PXNP49023 591 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms